Uncultured Sphingopyxis sp. UC10: SPPYR_2758
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Entry
SPPYR_2758 CDS
T05531
Symbol
mdh
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00020
Citrate cycle (TCA cycle)
sphu00270
Cysteine and methionine metabolism
sphu00620
Pyruvate metabolism
sphu00630
Glyoxylate and dicarboxylate metabolism
sphu00680
Methane metabolism
sphu00710
Carbon fixation by Calvin cycle
sphu00720
Other carbon fixation pathways
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01120
Microbial metabolism in diverse environments
sphu01200
Carbon metabolism
Module
sphu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphu_M00012
Glyoxylate cycle
sphu_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPPYR_2758 (mdh)
00620 Pyruvate metabolism
SPPYR_2758 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SPPYR_2758 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SPPYR_2758 (mdh)
00720 Other carbon fixation pathways
SPPYR_2758 (mdh)
00680 Methane metabolism
SPPYR_2758 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SPPYR_2758 (mdh)
Enzymes [BR:
sphu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SPPYR_2758 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
SBV33878
UniProt:
A0A1Y5PV47
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All DBs
Position
SPPYR:complement(2908754..2909716)
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AA seq
320 aa
AA seq
DB search
MGRKKIALIGAGNIGGTLALLAAQKELGDVVLFDVVEGVPQGKALDLSQVGPIAGFDAKI
TGTNDYKDIAGADVIIVTAGVARKPGMSRDDLLGINLKVMKAVGEGIKANAPDAFVICIT
NPLDAMVWALREFSGLPHNKVVGMAGVLDSARFSHFIADEFDVSVKDVNTFVLGGHGDTM
VPVVRYSTINGIPVPDLVKMGLSSQDKIDAIVKRTRGGGGEIVALLGTGSAFYAPAASGI
AMAEAYLGDQKRILPCAAYVDGQYGVDGLYVGVPVLIGANGVEKIVEIELDDADKAGLQV
SVDAVKELLDACKGLDSSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaagaagatcgctttgatcggagccgggaatatcggcggaacgctggcgctg
ctcgccgcgcagaaggaactcggcgacgtcgtcctgttcgacgtggtcgaaggcgtgccg
cagggcaaggcgctcgacctgtcgcaggtcggcccgatcgcgggcttcgacgcgaagatc
accggcaccaacgattataaggacatcgcgggcgccgacgtcatcatcgtcaccgccggc
gttgcccgcaagccgggcatgagccgtgacgacctgctcgggatcaatctgaaagtcatg
aaggctgtgggtgagggcatcaaggcgaacgcccccgacgctttcgtcatctgcatcacc
aatccgctcgatgccatggtgtgggcgctgcgcgaattctcgggcctgccgcacaacaag
gtcgtcggcatggcgggtgtgctcgattcggcgcgcttcagccacttcatcgccgacgaa
ttcgacgtgtcggtgaaggatgtgaacaccttcgtgctcggcggccacggcgacacgatg
gttcccgtcgtgcgttactcgaccatcaacggcattcccgttcccgacctcgtcaagatg
ggcctgtcgtcgcaggacaagatcgacgcgatcgtcaagcgcacccgcggcggcggcggc
gagatcgtcgcgctgctcggcaccggctcggccttctatgcccccgcggcctcgggcatc
gcgatggccgaagcctatctcggcgaccagaagcgcatcctgccctgcgccgcctatgtc
gacggccaatatggcgtcgacggcctttacgtgggcgtgccggtgctgatcggcgcgaac
ggcgtcgagaagatcgtcgaaatcgaactcgacgacgccgacaaggcgggcctgcaggtg
tcggtcgacgcggtcaaggaactgctcgacgcgtgcaagggtctggattcgagcctcgca
taa
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