Sphingopyxis sp. PAMC25046: E5675_02235
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Entry
E5675_02235 CDS
T06315
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5675_02235 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphx03400
]
E5675_02235 (nth)
Enzymes [BR:
sphx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E5675_02235 (nth)
DNA repair and recombination proteins [BR:
sphx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5675_02235 (nth)
Prokaryotic type
E5675_02235 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QCB53375
UniProt:
A0A4P7RT92
LinkDB
All DBs
Position
487961..488632
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AA seq
223 aa
AA seq
DB search
MKKADIFEFYRRLAELNPSPETELEFGNTYQLLVAVVLSAQATDVGVNKATRKLFREVKS
PQQMVDLGEEGLKQHIKTIGLFNAKAKNVIALSEILLRDFDGEVPADRDTLVELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTPLAVEKKLDKETPAPFRVGAHHWLI
LHGRYICKARTPECWRCPVADLCRYKPKTPAPKGRGRAEAAPG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggccgatattttcgaattctaccgccgtctcgccgagctcaaccccagtccc
gagaccgagctggagtttgggaatacctatcagctgctcgtcgcggtcgtgctctcggcg
caggcgaccgacgtcggggtgaacaaggcgacgcggaaactgtttcgggaggtgaagagt
ccgcagcagatggtcgatctcggcgaagaggggctcaagcagcacatcaagacgatcggg
ctgttcaacgcgaaggcgaaaaatgtcatcgcgctcagcgaaatcctcctccgcgatttt
gatggtgaggtacccgccgaccgcgacacgctcgtcgagctgcccggcgtcgggcgcaag
accgccaatgtcgtgatgaactgcgccttcggagctgaaaccttcgcggtcgacactcat
atctttcgcgtcggcaaccgcaccggcctcgcccccggcaaaaccccgctcgcggtcgaa
aagaagctcgacaaggaaacgcccgcgcctttccgcgtcggcgcgcatcactggctgatt
ctccacggccgctacatctgcaaggcgcgcacccccgaatgctggcgctgcccggtcgcc
gacctctgccgttacaagcccaagacgcccgcgcccaagggccggggacgcgccgaagcc
gcccccggctaa
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