Sphingopyxis sp. PAMC25046: E5675_14690
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Entry
E5675_14690 CDS
T06315
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sphx
Sphingopyxis sp. PAMC25046
Pathway
sphx01501
beta-Lactam resistance
sphx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5675_14690
01503 Cationic antimicrobial peptide (CAMP) resistance
E5675_14690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphx03036
]
E5675_14690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphx02000
]
E5675_14690
01504 Antimicrobial resistance genes [BR:
sphx01504
]
E5675_14690
Chromosome and associated proteins [BR:
sphx03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E5675_14690
Transporters [BR:
sphx02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E5675_14690
Antimicrobial resistance genes [BR:
sphx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E5675_14690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
Beta-barrel_RND_2
YknX_C
HH_YBHG
BSH_RND
BSH_CzcB
HH_MFP_RND
HH_EMRA
CzcB_C
Beta-barrel_AAEA
BSH_CusB
HH_AprE
Biotin_lipoyl
BSH_YknX
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QCB55551
LinkDB
All DBs
Position
complement(3111458..3112678)
Genome browser
AA seq
406 aa
AA seq
DB search
MPRRAGRVLGVNYERKVDSMDSLAGTQSFYEEVDGSRRKRTRLIIAVVLIVVALAAAYYA
YSSGKGAADAGGGEAAAVPNITVIIPGRVSVEAAIAANGTIAARREMPVGVAGEGGQVVR
VLVEPGQWVGAGQTLAVIDRSVQAQQAASLAASIRVAQADADLAQAELERAQALVGRGFI
SKADMDRKRATRDAANARVRVAQAQYAEATARNDRLNIVAPAAGLVLTRQVEPGQIVGSG
SGVLFRMARGGEMEMLAQMAEADLARVKVGTRATVTPVGTDAQIAGQVWQVSPVVNMDTR
QGMVRIAVPYSSVLRPGGFADARLVSGTAEAPLLPESAVQSGAEGNFVLIVGKDDKIERK
PVKVGAVSDAGVSIASGLTGNERVVTLAGAFLNVGDKVKPVLQKSS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagggcagggagggttttgggcgtgaactacgagcggaaagtggattcgatg
gacagcctggcgggcacgcaaagcttttacgaagaggtcgacggcagccgacgcaagcgg
acgcggctgatcattgcggtcgtgctgatcgttgtggcgctggcggccgcctactatgcc
tattcaagcggcaagggcgctgccgatgccggcggcggcgaagcggcagcggttccgaac
atcaccgtgatcattccgggccgggtatcggtcgaagcggccattgccgcaaacggcacg
atcgcggcgcgccgggaaatgccggtcggcgtggccggggagggcggacaggtcgtccgc
gtacttgtcgagcccggccagtgggtcggcgcgggacaaacgctcgcggtgatcgaccgt
tcggtgcaggcgcagcaggcggcaagcctcgcggcgtcgatccgtgtcgcgcaggccgac
gccgatctcgcgcaagccgaactcgaacgcgcgcaggcgctggtcggccgcggctttatt
tcaaaggccgatatggaccgcaagcgcgcgacccgcgatgccgcaaatgcgcgcgtgcgc
gtggcgcaggcgcaatatgccgaagcgacggcgcgcaatgaccggctcaacatcgtcgcg
ccggcggcggggctggtgctgacgcggcaggtcgaacccggtcagattgtcggttccggc
agcggtgtgctgttccgtatggcgcgcggcggcgagatggagatgctcgcgcagatggcc
gaggccgatctggcgcgcgtcaaggtggggacgcgtgcgaccgtcaccccggtcgggacc
gatgcacagatcgcggggcaagtgtggcaggtgtctccggtcgtcaacatggatacgcgc
cagggcatggttcgcatcgcggttccctattcatcggtgctgcgtccgggcggtttcgcc
gacgcgcggctcgtgtcgggcacggcggaagcgccgctgctccccgaaagcgccgtgcag
agcggtgccgaaggcaatttcgtgctgatcgtcggcaaagacgacaaaatcgagcgcaag
ccggtgaaggtcggcgccgtcagcgatgccggcgtatcgattgcgtcgggactcacgggc
aacgaacgggtggtgacgctcgccggcgccttcctcaacgtcggcgacaaggtgaagccg
gtactgcagaagtcgtcgtaa
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