Sphingorhabdus sp. YGSMI21: CHN51_08320
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Entry
CHN51_08320 CDS
T05308
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHN51_08320 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_08320 (nth)
Enzymes [BR:
sphy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHN51_08320 (nth)
DNA repair and recombination proteins [BR:
sphy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHN51_08320 (nth)
Prokaryotic type
CHN51_08320 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ATW03537
UniProt:
A0A2D3RE73
LinkDB
All DBs
Position
complement(1714095..1714736)
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AA seq
213 aa
AA seq
DB search
MKKADIFEFYARLAADNPSPETELNYGNVYQLVVAVALSAQSTDIGVNKATRKLFAEVTT
PQQMVDLGLDGLKEHIKTIGLYNTKAKNVIALSEMLIAEYGGEVPADRDELVKLPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTVLAVEKKLEKQTPAPFRVHAHHWLI
LHGRYICKARKPECWRCPVADLCRFKKKTPAPA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagccgatatcttcgaattctacgcccgcctcgccgccgacaatccttcgccg
gagaccgagctcaactatggcaatgtctatcagctggtcgtcgccgtcgccctgtccgcg
caatcgaccgacatcggcgtcaacaaggcgacgcgcaagctgttcgccgaggtgacaacg
ccgcagcagatggtcgatctcggcctcgacgggctgaaggagcatatcaagacgatcggc
ctctataataccaaggcgaagaatgtgatcgccctgtcggaaatgctgatcgccgaatat
ggcggcgaggtaccggccgaccgcgacgagctggtcaagctgcccggcgtcgggcgcaag
accgccaatgtcgtgatgaactgtgcctttggcgcggagaccttcgcggtcgacacgcat
attttccgggtcggcaaccgcaccggtctggcgccgggcaagaccgtgctggcggtcgag
aaaaagctggagaagcagacccccgccccgttccgcgtccacgcccatcactggctgatc
ctgcacggccgctatatctgcaaggcgcgcaagccggaatgctggcgctgtccggtcgcc
gatctgtgccggttcaagaagaagacacccgcgcccgcctga
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