Sphingobacterium sp. CZ-2: E3D81_05060
Help
Entry
E3D81_05060 CDS
T06166
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz01501
beta-Lactam resistance
sphz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3D81_05060
01503 Cationic antimicrobial peptide (CAMP) resistance
E3D81_05060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphz03036
]
E3D81_05060
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphz02000
]
E3D81_05060
01504 Antimicrobial resistance genes [BR:
sphz01504
]
E3D81_05060
Chromosome and associated proteins [BR:
sphz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E3D81_05060
Transporters [BR:
sphz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E3D81_05060
Antimicrobial resistance genes [BR:
sphz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E3D81_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
YknX_C
BSH_CzcB
BSH_CusB
RND-MFP_C
BSH_YknX
Biotin_lipoyl
HH_MFP_RND
Beta-barrel_RND_2
HH_YBHG
HH_EMRA
DUF4407
BSH_RND_rel
DUF2080
HH_CzcB
CBP_BcsR
Motif
Other DBs
NCBI-ProteinID:
QBR11573
LinkDB
All DBs
Position
1109552..1110703
Genome browser
AA seq
383 aa
AA seq
DB search
MNYLTKNTALAALSTVLFASCGGNDAPQEEARPYPVVEVDSRDVQAYQTYPTSIQGTNNN
DVRAKIQGYIRDVLVDEGQRVRRGQIMFRLETNALTQNANAAQSGVAAARARVEAAQVEV
NKLQPLVNQNIVSGVLLETAKVNLLQAQSELEQAQANHKSIIANVDYSVIRAPIDGVVGK
INLRVGALVGASDQTPITTVSDVNELYAYFSMNEAEYINFLYETAGNSLEEKLKNVPPVE
LVMANGRLYEEKGKISAVTGQINPQTGSIQFRVSFPNQQRVLTHGNSGTIRIPKTYKNVL
VIPETGIFEQQGKVFAYTVKNDTVKLAEINQISRIDKLVLVESGLKQGDIVVATGVASLR
TNDIIQPTKTVTDSITNNIQPIF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttaacaaaaaatacagcccttgcagccctgtcaacggtactttttgcttcc
tgcggagggaatgatgccccacaggaagaagcacggccttaccctgttgtcgaagttgat
agcagggatgttcaggcataccaaacttaccccacttctatacagggaaccaataataac
gatgtccgtgccaagatacagggctatataagggatgtgctggtggatgaggggcagcgt
gtacgcagagggcaaattatgttccgtttggaaaccaatgcccttacccaaaatgcaaat
gcggcgcaatcgggcgttgcggcagcacgggcaagagtggaagcagcacaggtggaggtg
aacaagctgcaacctttggtcaatcagaacattgtcagtggtgtgctactggaaactgcc
aaagtaaatctcttgcaagcccaaagtgaactggagcaagcgcaggcaaaccataagagc
attatcgccaacgtggactattcggttatccgtgcgccaatagatggcgtagtcggcaaa
atcaatttaagggtgggtgctttggtcggggcatccgaccaaacaccgattacaacggta
tctgatgtcaatgagctatacgcctatttttccatgaatgaagcagaatacatcaatttc
ctgtacgaaacagcgggcaattctttggaagaaaaattaaagaacgttccacctgtcgaa
ttggtaatggcaaatggcaggttatacgaagaaaaagggaaaatcagtgcggtcacagga
cagataaatccacagaccggaagtatccagttccgtgtttcctttcccaaccagcaacgt
gtacttacccacgggaacagcggaacaatccgcattcccaagacatacaaaaatgtactg
gtcattcccgaaacaggaattttcgagcaacagggcaaagtattcgcctataccgtcaag
aacgataccgttaaactggcagagataaatcaaatcagcaggattgataaattggtactt
gtcgaaagtggattgaaacaaggcgatatcgtagtggcaactggtgtggcaagtttgcgt
accaacgatataatacagccaacgaaaactgttacggacagtattaccaataacatccag
ccaatattctaa
DBGET
integrated database retrieval system
