Staphylococcus piscifermentans: SAMEA4384060_2470
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Entry
SAMEA4384060_2470 CDS
T06938
Symbol
vba
Name
(GenBank) ABC transporter ATP-binding protein
KO
K19349
pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
Organism
spic
Staphylococcus piscifermentans
Pathway
spic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4384060_2470 (vba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spic02000
]
SAMEA4384060_2470 (vba)
01504 Antimicrobial resistance genes [BR:
spic01504
]
SAMEA4384060_2470 (vba)
Transporters [BR:
spic02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
SAMEA4384060_2470 (vba)
Antimicrobial resistance genes [BR:
spic01504
]
Gene variants
Macrolide resistance genes
Transporters
SAMEA4384060_2470 (vba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
AAA_17
AAA_18
AAA_16
ABC_tran_Xtn
AAA_33
NACHT
MMR_HSR1
AAA
AAA_23
AAA_15
AAA_30
MeaB
cobW
AAA_14
NB-ARC
KAP_NTPase
Roc
T2SSE
Glyco_hydro_47
DUF815
SbcC_Walker_B
DUF4423
G-alpha
Motif
Other DBs
NCBI-ProteinID:
SNV09766
LinkDB
All DBs
Position
1:2554541..2556127
Genome browser
AA seq
528 aa
AA seq
DB search
MGSIEANHISLSIGARCLFEVSHLSVQPRARIGIVGRNGSGKSTLLKVLSGAIEPDSGHV
NRKGIIAHIPQFTQWNSHLSGGEMMRKYVSEALKKNADILFADEPTTHLDVEAIEALESE
IKQFTGACVIISHDRTFLKRTCQTIWEINNQTVAVFNGGYDAYAAQKADLEKQAWDDYHQ
YEQKKKQLEQAIQSKQQRAQGATKVPKGIGANEAANFKHHYQGKQKKLDQNAKTMQKRLD
QLEVKQRPESVESIQLSLPFADKLRNKSVIHADYFSKSIGNKALWKDAYFYMNGGDKIGL
VGANGSGKSTFLKAVVENEEGLKLSPSLRIGYLSQKLSELDEDKDILNFIKAHSEHDETL
IRTVLARMHFRRDSVYKKIAVLSGGEKVKVALCQLILSPFNLLILDEPTNSLDIESIEAL
EQLLKDYEGTSIIVSHDREFLANVTNKILYLSDQQLKLFNEDYHHFVKTLEQPEVTEDKT
ALRNQLMLIENRISDILSRLSLNPSDELDAQFQEYLKEKRTILEKLNE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtattgaagcgaatcatatttcattgagtataggggcccgctgtttatttgaa
gtctcacatttaagtgtgcaaccacgtgcacgtatcgggattgtgggcagaaacggcagc
ggaaaatcgactttactcaaagttttaagcggagcgattgagcctgacagcggacatgtt
aatcgcaagggtataattgcacacattccgcaatttactcaatggaacagtcacttgagc
ggtggcgaaatgatgcggaagtatgtttctgaagctttaaagaaaaatgcggatatttta
tttgcggatgaaccgacaacgcatttggacgtagaagcaattgaagctttagagtcagaa
atcaagcagtttacaggtgcgtgtgtgattatttcgcatgatagaacgttcttaaagcgg
acttgccaaacaatatgggaaatcaataatcagacagttgctgtatttaatggcggttat
gatgcttatgctgcacaaaaagcggatttggaaaagcaagcgtgggatgattatcatcaa
tatgagcagaagaaaaagcaactggaacaagcaattcagtctaaacaacaacgtgcgcaa
ggagccacaaaggtgcctaagggaattggagcgaatgaagcagctaacttcaagcatcac
tatcaagggaaacagaaaaaattagatcaaaatgcaaaaacaatgcagaagcggttggac
caactggaggtaaaacaacgtccggaaagtgttgaatctattcaattaagtttacctttt
gcagacaagttgagaaataaatcggtgattcacgcagattatttttcaaaatctattggt
aataaagcattgtggaaagatgcttatttttacatgaacggcggcgataaaatcggctta
gtcggagcaaatggttcaggtaaatcaacgttcctaaaagcagttgtagaaaatgaagaa
ggtctaaaactgtctccaagtttacgcattgggtatttaagtcagaagttaagcgaatta
gatgaagacaaagatattttgaatttcatcaaagcgcatagcgaacacgacgaaactttg
attcgaactgtattagcacgtatgcattttcgtagagattcagtttataagaagattgca
gtgttaagcggtggtgaaaaagtcaaagttgctttatgccagttgattttaagtcctttt
aacttattgatattagatgagcccacgaattcattagatattgaatctattgaagcttta
gaacagctcttaaaagattatgaaggcacaagtattattgtatctcatgatcgagaattt
ttagcgaacgttactaataagatattatatttatccgatcaacaattaaagttgtttaat
gaagactatcatcatttcgttaaaacactagaacagcctgaagttacagaagacaaaaca
gcattacgtaaccaactcatgttaatagaaaatcgtatttcagacatcttaagtcgtttg
agtctcaatccctcagatgaacttgatgcccagtttcaagaatatttgaaagaaaaaaga
acgatacttgaaaaattaaatgaataa
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