Sphingomonas piscis: G7077_11905
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Entry
G7077_11905 CDS
T07460
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spii
Sphingomonas piscis
Pathway
spii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G7077_11905 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spii03400
]
G7077_11905 (nth)
Enzymes [BR:
spii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G7077_11905 (nth)
DNA repair and recombination proteins [BR:
spii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G7077_11905 (nth)
Prokaryotic type
G7077_11905 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Ogg-HhH
DUF7024
HHH_5
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QIK79505
UniProt:
A0A6G7YRY6
LinkDB
All DBs
Position
complement(2338000..2338677)
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AA seq
225 aa
AA seq
DB search
MKRDDIFEFFRRLAEANPSPQTELEYSSPYTLLVAVVLSAQATDVSVNIACRPVFATIST
PEQMVVLGEDRLREAIKTIGLFNTKAKNVIALSEALIRDHDGEVPRTREELEKLPGVGRK
TANVVLNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLDVELKLERLVPQPFRRDAHHWLI
LHGRYTCKARRPECWRCPMVDLCRFKDKNLVPPKGSDPAALESGA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcgacgatatcttcgagttcttccggcgactggcggaggcgaacccgtcaccg
cagaccgagctcgagtacagcagtccctacactctcctggttgcggtggtgctgtcggcg
caggcgaccgacgtcagcgtcaacattgcctgccggccggtgttcgcaacaatcagcacg
cccgagcagatggtcgtgcttggtgaggaccggctacgcgaggcgatcaagaccatcggc
ctgttcaacaccaaagccaagaatgtcattgcgctcagtgaggccttgatccgcgaccac
gacggcgaggttcctcggactcgcgaggagctggaaaaactgccgggcgtcggccgcaag
actgccaacgtggtgctgaacaccgccttcgggcaggagacgttcgcggtcgacacccac
atcttccgggtcggtaaccgcacggggcttgcaccaggcaagacgccgctggacgtcgag
ctgaagctggaaaggctagtgccgcagcccttccgccgcgatgcgcatcactggctgatc
cttcacggacgctatacctgcaaggcacgtagacccgaatgctggcgctgtccgatggtc
gacctatgccggttcaaggacaagaacctggtgccgccgaaaggatcagatccagcggcg
ctcgaatcgggcgcctag
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