Spirosoma sp. KCTC 42546: EXU85_04385
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Entry
EXU85_04385 CDS
T06164
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_04385
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_04385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spik03036
]
EXU85_04385
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_04385
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_04385
Chromosome and associated proteins [BR:
spik03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EXU85_04385
Transporters [BR:
spik02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EXU85_04385
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
BSH_CusB
HH_MFP_RND
Biotin_lipoyl
YknX_C
HH_EMRA
BSH_YknX
BSH_CzcB
Beta-barrel_RND_2
HH_YBHG
HH_CzcB
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
QDK77867
LinkDB
All DBs
Position
complement(1041453..1042535)
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AA seq
360 aa
AA seq
DB search
MNRMLMLMSLCALWCFTSCSHKEEEKEEEVNYLVTSPLKKDTTITNDYVSQIHSIQHIEI
RALEKGYLQKIFVDEGQYVKKGQLMFQILPIQYQAELLKAQAEANFVDVEYKNTKLLADS
NIVSKNELALAKAKLDKAKAEVSVAQIHLGFTEVRAPFDGIMDHFQVRLGSLVNEGDLLT
TLSDNSKMWVYFNVPEAEYLNYKTHAQQENLTSVNLLMANQRVYDHPGVVQTIEADFNNE
TGNIAFRATFPNPNGLLRHGETGNIQMTLPLKNALIIPQKATFEVLEKKYVYIVDKDNKI
RSREITIAAEMPHIFVVRTGLTKDDKILLEGLRQVRENEKIHYKFVKPDSVISNLSLYAE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaatgctcatgctcatgagcttgtgtgccttgtggtgctttacaagctgttca
cataaagaagaagaaaaggaagaagaagtcaactatctggtgaccagtccactgaaaaaa
gacacgacgatcacaaatgattacgtatctcaaatccactcgatccagcacatcgaaata
agagcgctggaaaagggttacttacagaaaatcttcgtagacgaaggccagtacgttaaa
aaagggcagctcatgtttcagattctgccaattcaataccaggctgaattactgaaagca
caggctgaagccaattttgtagacgtcgaatacaaaaacacaaaactactggcggatagt
aatattgtttcaaaaaatgaattggctctggccaaagccaagttagacaaagcgaaagct
gaagtatctgtagcgcagattcaccttggatttaccgaggtaagagcgcctttcgatggt
atcatggaccactttcaggtacggttgggtagccttgttaatgagggtgatttactgact
acactctccgataacagcaaaatgtgggtgtacttcaacgtacccgaagccgagtacctg
aactataaaacccacgctcagcaggaaaatctgactagtgtaaacctactgatggccaat
cagcgagtgtatgatcatccgggcgtggttcaaacaattgaagccgacttcaacaacgaa
accggaaacattgcgtttcgggctaccttcccaaacccgaacgggctgttacgtcatggc
gaaacgggtaatatccaaatgactttaccgcttaaaaatgctctgattattccacagaaa
gccacgttcgaagtccttgaaaagaagtatgtgtatatagtggataaagacaataaaatt
agatcccgggaaatcaccatagctgcagaaatgccccacatttttgttgttcggactggt
ttgactaaagatgataagatccttctggaaggcttacgtcaggtacgcgaaaatgaaaaa
atacactacaagttcgtaaaacctgattcagtcatctctaatctaagtttatatgccgaa
taa
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