Spirosoma sp. KCTC 42546: EXU85_16005
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Entry
EXU85_16005 CDS
T06164
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_16005
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_16005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spik03036
]
EXU85_16005
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_16005
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_16005
Chromosome and associated proteins [BR:
spik03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EXU85_16005
Transporters [BR:
spik02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EXU85_16005
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
HlyD_2
O_Spanin_T7
OEP
Motif
Other DBs
NCBI-ProteinID:
QDK80029
UniProt:
A0A514ZZJ9
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All DBs
Position
3941858..3943000
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AA seq
380 aa
AA seq
DB search
MENLVRWTAAVLVCVSVVGCAGSETKTEEPEKLTLPVVQLSRQSTTLQRDYVTTLEAVRN
VEIRARVSGFLEKIYVDEGQTVRQGQLLFSLNAAEYKVGLDKARASLRSAEAGAKTAEVE
VGRVKLLVDKKIVSPSELELAKAKLDVARAQIEEAQSAQSTASLRLAHANIRAPFDGVIN
RIPFKMGSLIEEGALLTEVSDIHEVFAYFDVSEKEYLGFLKKHRDLVGKNGQEVEMMLAD
ETPYPQKGRIETMESVFEEESGTIAFRARFPNPLKMLKHGSSGKVRIPSIESDALLVPQK
AVFEVQDKNYVYVVDKANKVKSRSFVPQARVGQNYIVRSGLQAGDRVVYEGIQNIRDGDQ
IIPEAVSADRLASQNTLAQQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttggtgagatggacagctgccgttttggtatgtgtatcggttgttggttgt
gccggtagcgaaacgaaaaccgaggaacctgaaaaactgaccctgcccgtcgttcagtta
tcccggcaatctactacactgcaacgtgattacgtaacaaccctggaagctgttcgaaac
gtggaaatccgcgccagggtgtcgggctttctggaaaaaatatatgtcgatgagggacag
accgttcggcagggccaactgctgtttagtttgaatgcagccgaatacaaagttggattg
gataaagcccgcgctagcctgagaagtgccgaagccggagcgaaaacagccgaagttgaa
gtaggtcgggtaaagttgctggtcgataaaaaaattgtctcaccctctgagctagaactg
gcgaaagctaaactggatgtcgcccgagcccagatcgaagaagcacaatcggcccaatca
acggcctctcttcggctcgcccatgccaacattcgggcacctttcgatggcgttattaac
cgcattcccttcaaaatgggcagtctgattgaagagggggccctgctcacggaggtgtct
gatatccacgaggtgtttgcctacttcgacgtatcggagaaagaatacttggggtttctg
aaaaaacaccgcgatctggtgggtaaaaatgggcaggaagtagagatgatgctggccgat
gagaccccttacccgcaaaaaggacggatcgaaacgatggagagtgtatttgaagaggaa
tccggcaccattgcgtttcgggcccgatttcccaacccactcaagatgctgaaacacggt
tcgtcgggtaaagttcggattcccagcattgaaagcgatgccttactggttccgcagaaa
gcggtattcgaggtgcaggataaaaactacgtctatgtagttgataaggccaataaagtg
aagtcgcggagtttcgtgccgcaggcccgggttggtcagaactacattgttcggtcggga
ctgcaagcgggtgatcgggttgtctatgaaggcatccaaaatattcgggatggcgatcag
atcattccggaagccgtttccgccgatagattggcttcgcaaaatacgcttgctcaacag
tga
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