Spirosoma sp. KCTC 42546: EXU85_25060
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Entry
EXU85_25060 CDS
T06164
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_25060
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_25060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spik03036
]
EXU85_25060
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_25060
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_25060
Chromosome and associated proteins [BR:
spik03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EXU85_25060
Transporters [BR:
spik02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EXU85_25060
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_25060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF6491
NOC3p
Motif
Other DBs
NCBI-ProteinID:
QDK81701
UniProt:
A0A515A4C5
LinkDB
All DBs
Position
complement(6073537..6074679)
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AA seq
380 aa
AA seq
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MKSFFNLTISVATAAGIAACSTASSDNKTTAAKEPEAQQVAVTTVQELQPSKRVTLPGEL
KPWNRVNMYAKVKGFVRDISVDRGTLVRKGQVLARLDAPEVISELSQAQAQVQAQEATLV
EQTTRARASRLTYNRLLQTAKMEGAVSANEIDQALARMQGDSAMVAVARGTVQAARSNYQ
AKTELRQYLTITAPFDGMVIERNISPGALVGAGDSGKPLFVLEDSRTLRLTVAIPESFAN
QLKAKSAVSFTVNAMPNRQFKAKLARSAQSLVEANRSMMAEFDVANPGHELKAGMYAEVL
MPIERTGKTMFVPTTSVVSSSEKMFVIKVNDNRAQWVSVQKGNVLDSLVEVFGDVQPGMT
IVKTASEEIRDGQEVKSVKK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgttttttaatctaaccatatctgtcgccactgctgccggaattgccgcctgc
tcgacggccagcagcgataataaaacgactgccgcgaaagaacccgaagcccagcaggtt
gcggtgacgactgtgcaggaattacaacccagcaaacgcgttaccttgcccggcgaattg
aagccctggaatcgggtgaacatgtacgccaaagtgaaaggttttgtgcgcgatatttcg
gtggatcggggaacgctggttcgcaaagggcaggtgctggcccgactcgatgcgcccgaa
gtgatttcggagttgagccaggcacaggcgcaggttcaggcgcaggaagctacgttggtg
gagcaaacaactcgtgctcgtgccagccgattaacgtataaccgcttgctacaaacggcg
aagatggaaggtgctgtatcagcgaatgaaatcgatcaggcactggccagaatgcagggc
gacagtgccatggtagccgtagcgaggggtacggttcaggctgcccggtcgaactaccag
gccaaaaccgaacttcggcaatacctcactattacggctcctttcgatggtatggtaatt
gaacggaacatcagtcctggtgccttagttggtgcaggcgatagtggcaagccgttgttc
gtactggaagacagtcggacgttgcggttgacggtggccattccggagtcgtttgccaat
cagctaaaggcaaaaagtgccgtttcctttacggtgaacgccatgcctaaccgccagttc
aaagcgaaactggcccgttctgcccaaagtctggtcgaagccaatcgctctatgatggct
gaatttgacgttgccaatcccggccacgaactgaaagcgggtatgtacgctgaagtgtta
atgccaatcgaacgaacgggcaaaaccatgttcgtgcctacaacatcggtggttagctcc
agcgaaaaaatgtttgtgatcaaagtcaacgacaaccgggcgcaatgggtatcggtacaa
aaaggcaacgtgctggatagcttagtcgaagtctttggcgatgtacaacccggcatgacc
attgtgaaaaccgcttccgaagaaattcgggacggtcaggaagtaaagagtgtgaagaag
tag
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