Spirosoma sp. KCTC 42546: EXU85_28345
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Entry
EXU85_28345 CDS
T06164
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_28345
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_28345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spik03036
]
EXU85_28345
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_28345
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_28345
Chromosome and associated proteins [BR:
spik03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EXU85_28345
Transporters [BR:
spik02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EXU85_28345
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_28345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
OSCP
CSD2
DUF5318
Motif
Other DBs
NCBI-ProteinID:
QDK82308
UniProt:
A0A515A684
LinkDB
All DBs
Position
complement(6940847..6941971)
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AA seq
374 aa
AA seq
DB search
MKRLINKPVRGLLILTGGLLLASVLTNCHSSESKAEAKEAETADAPVAAAEVFSLKKGKL
SSSLHIPGELVAFRDVDIYAKVSGFIKSLNVDVGSEVKQGQLLALAEAPELSAQLSSAES
RLKAQEAVSIGSKANYERVLEASKFSGAVSKNDVDLALAKRNADLAQLEAAKSAYREVAD
LKKYLEIRAPFNGIISARNASTGAYIGPSGKGSEFPLFVLTEQKRLRLVISVPEAYTGYV
DQNDEVSFTVKTFPDKKFTGQIKRLSGALDKRLRSERVEVDVINNDKKLLPGMVAEVNLP
LPTKTSTFVVPKSAIVNATTGVFVIRVKDHKAEWVPVKKGLEADNKIEIFGQLTEGDSLI
TTATEEIRDGAPVK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggctaatcaataaaccagtgcgtggtctgcttatccttacaggcggtctgctg
ctggccagtgtgctaacgaattgtcattcttccgaaagcaaagcagaagcgaaagaagcc
gaaacggctgatgcgccagtggccgctgctgaggtattttcattgaaaaaaggtaagctc
tcttcttccctgcacatccccggtgaattggttgcatttcgcgatgtagatatttacgct
aaagtgagcggctttattaaatcgctgaatgtggatgttgggtctgaagtgaaacagggc
caattactggcgttagccgaagcacctgagctaagcgcccaattaagttctgcggaatcg
cgccttaaagcacaggaggccgtttccattggcagtaaggctaattatgagcgggtttta
gaggccagcaaattctccggtgccgtttcaaagaatgatgttgatctcgccttggcgaaa
cgtaatgccgacctcgcccaactggaagcggctaaatcggcttaccgcgaagtggccgat
ttaaagaaatacctggaaatcagagcgccgttcaacggaattatcagtgcccgtaatgcc
agcacaggtgcctacatcggaccatcaggcaaagggtcagaatttcccttgtttgtattg
accgagcaaaagaggcttcgtttggttatttcggtccctgaagcctacacgggctatgtt
gatcagaatgatgaagtgagctttacggtcaaaacatttcccgataagaaatttaccggc
cagataaaacgcttatcgggcgcgctcgacaaacgcttacggtcggagcgggttgaagtg
gatgtgatcaacaatgataagaagctgctacccggtatggtagctgaagtaaacctgcca
ctacctacgaaaacgagtacgtttgttgtgccgaaatcggctatcgttaacgcaacgacg
ggcgttttcgtgatccgggttaaggatcataaagcggagtgggtacctgtgaaaaaagga
ttggaagccgacaataaaatcgaaatcttcggtcagttaaccgaaggggattcgctcatt
acaaccgccacagaagaaattcgggatggtgcgccggtgaagtaa
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