Spirosoma sp. KCTC 42546: EXU85_29000
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Entry
EXU85_29000 CDS
T06164
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_29000
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_29000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_29000
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_29000
Transporters [BR:
spik02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EXU85_29000
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_29000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Insulin_TMD
Motif
Other DBs
NCBI-ProteinID:
QDK82428
LinkDB
All DBs
Position
complement(7094010..7097159)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSVTEIAIKRPTLVVVAFTILGILGFISYKSLNYTLLPKFDAAVVTVITTYPGAAAGEVE
NSVTRKLEDAVSSLENLKNISSTSQEGLSVIQIELAASADPNQALQDAQRKVNAVLSQLP
DEVESPTLQKFSTDDVPVIRMGVRGNLEATKLYDLVDDQIRTQLTKVDGVGQVTLTGGRE
REIKIGVDPNKLKLYNLSLAQVTQAVNSANLDYPTGRIETDQAQYAIRLAGKFTDINQIR
NAALVTSTNGTNVVLSDVATVTDGVSDATTINRINGRESIGISIQKQTDANAVAISQQVR
GILGGIEKQYANIGLKFEITSDSSTYTLASAEGVIFDLEFAVVLVALVMLLFLHSIRNAF
IVMVSVPASIISVFVPMYLLGFTLNLMTLMALSLVVGILVDDSIVVLENIYRHLEMGKDR
RTAALDGRNEIGFTALAITMVDVVVFLPLVFVQGLIANIIREFSLVVVFSTLMSLIVSFT
ITPLLASRFAKETDLKGPGLGKRFLSWFEGQFDSLKHGYARLLTWSLGHKRWVYITAITL
LIASFGLVGGGFIGTTFFPQSDQGEFIVQIEGEPFNSLAETNRICQKIEKQLMSNKLVTK
VNSNVGYSSAASGGGLGSTPYHKAEITVTIVPKQQRTISVEKFAAQTKAEILKTPGLNVK
SAPLAITGGANAAPIQILLLGNSQQDLQQAATIVKQVVKSVSGTTDVELGVDDPKPELKV
NLDRRQMAQYGVSVANIGATLQTAFSGNTDSKYRVGSRDYDIRVELNKFNRQSKDDVGNL
TVPDGKGKLIEVRQIANLELGTGATQLTRYNRVGSLFVNANVVGRPTGTVGTEIDNILKT
KQLPGGVTYKLKGDLERQSDAFSSLGIALGLAITFVYLLMVALYNSYFRPFVVLFSIPMA
IIGAFLALALAEQAISFFVMLGMIMLIGLVAKNAILLVDFANAQKEEGKSTVDALVEAGR
ERIRPILMTTIAMAIGLLPMALATGDGSESKNGLAWVIIGGLISSLLLTLVLVPTVYLTF
ENAFNGIHRLTARLSGKKDKPVPANPAKV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaacagaaatagccattaaacgcccaacgctggttgttgtggcttttacaatc
ctgggtattttgggctttatctcgtataaaagcctgaactataccctattgccgaaattc
gatgcggctgttgtcacggtaattactacgtatccgggagccgctgccggtgaggtcgaa
aactccgtgacccgcaaactcgaagatgcggtgtcatcactcgaaaatttgaaaaacata
agttcgaccagtcaggaggggctttctgttattcagattgaactagccgccagtgccgat
ccgaatcaggccttgcaggatgcacagcgaaaagtgaatgctgtactctcgcaactgccg
gatgaagtcgaatcgccgacactacaaaaattctcgaccgacgatgtgcccgttattcgg
atgggggttcggggaaatctcgaagccactaaactctacgatctggttgatgatcagatt
cgtacgcaactgacgaaagtggatggcgtagggcaggtaaccctaacgggtggtcgcgag
cgtgaaatcaagattggtgttgacccgaacaaactcaaattgtataacctctcgctggcg
caggtaacacaggccgtcaattcggccaacctcgattacccaacgggtcgtattgaaacc
gatcaggcgcaatacgccatccgattggcaggtaagttcaccgatattaaccagatccgg
aatgcggctctggtcacatcgacaaacggaacgaacgtagtattgagtgatgtagccact
gtaaccgatggggtttcggatgcaacgaccatcaaccggatcaatggacgcgaatccatt
ggtatttcgatccagaaacagaccgatgccaacgccgtggccattagccagcaagtgcgc
ggtattctggggggcatcgaaaagcagtacgctaacatcggcttaaaatttgaaatcacc
agcgattcatcgacctacacactggcatctgccgagggtgttattttcgaccttgagttt
gcggttgtgctggtggcactcgtgatgctgctgtttttgcatagtatccggaatgccttc
atcgtgatggtatcggtaccagcgtcgattatttcggtttttgtaccaatgtatctgctg
ggctttacgctcaacctaatgaccctgatggccttgtcattggtagttggtattctggtc
gatgactcgattgtggtgttggagaacatttaccgccacctcgaaatgggcaaagatcgc
cgaacggctgccctcgatgggcggaatgaaattgggttcactgcgctggctattaccatg
gtggacgttgtggtgttcttgccgctcgtatttgtgcagggtttgattgcgaatatcatt
cgggagttctcgctggtcgtggtgttctcaacgcttatgtcgctgattgtatcctttact
ataaccccgttgctggcgtcgcgttttgctaaagaaactgacctgaaagggcctggtctt
ggcaaacgattcctgtcgtggtttgaaggacaattcgactcgcttaaacatggctacgcc
cggttacttacgtggagtctgggtcacaaacgctgggtgtatatcacagctattacccta
ctgattgcttcatttggtctggtaggcggtggcttcattggaacgacctttttcccgcag
agtgaccagggcgaatttatcgtacagatcgaaggtgagccctttaatagtctggccgaa
acgaaccgaatttgccagaagattgaaaagcaactgatgagcaacaagctggttacgaaa
gtcaacagcaacgttgggtattcgagcgctgcatcgggtggcggattaggatcgacacct
tatcataaggcggagattacggtaactatcgtacccaagcagcaacggactatttcggtt
gagaaatttgccgcccaaacgaaagcggagatacttaaaacgcccggcctgaacgttaaa
tcggcacctctggccattacaggtggtgccaacgcggccccgattcaaattctattactg
ggaaattcgcagcaggatctacaacaggcggcaactattgtgaagcaggtcgtgaaatcg
gtaagcggaacgaccgacgtagagttgggcgtggatgatcctaaaccggagttgaaagta
aatctcgatcgtcgtcaaatggcgcaatacggggtatccgtggctaatataggcgctact
ttgcagacagccttctcgggcaatacggatagtaaataccgggtcggtagtcgtgattat
gacatccgggttgaactcaacaagtttaaccgtcagagtaaagacgacgtgggtaacctg
acagtacccgatggaaaaggaaaactgatcgaagttcggcaaattgccaatttagaactg
ggtacgggtgccacacagttgacgcgttataaccgggttggctccttgtttgtcaatgcc
aacgttgtgggccgcccaacgggtacggttggtacggagatcgacaatattttaaaaacg
aagcagttgccgggtggcgtaacctataagttgaaaggtgatctggaacgacagtcagat
gcgtttagtagcctgggcattgccttgggcttggccatcacctttgtgtatctgctgatg
gtagcgctgtacaactcgtatttccggccgtttgtggtcctgttctccatcccaatggcg
attatcggtgcatttctcgcactggccttagccgaacaggcgatctccttcttcgtaatg
ctggggatgatcatgctgattggtctggtagctaaaaacgctatcctgctggttgacttt
gccaatgcacaaaaggaagaaggaaaaagcacggttgatgcacttgtcgaagcgggtcgc
gaacggattcgtcctattctgatgacaaccattgcgatggcaattggcctgttaccgatg
gccctggccacaggcgatggctcagagtcgaaaaacggcttggcctgggtaattattggc
ggtctgattagttcgctgcttcttacgctggttctggttccgacagtctatttaaccttt
gagaatgcctttaatgggattcatcgtctgacagcccggttgagcggcaagaaagacaag
cctgtaccggctaatccagccaaggtctag
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