Spirosoma sp. KCTC 42546: EXU85_31945
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Entry
EXU85_31945 CDS
T06164
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXU85_31945 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_31945 (nth)
Enzymes [BR:
spik01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EXU85_31945 (nth)
DNA repair and recombination proteins [BR:
spik03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXU85_31945 (nth)
Prokaryotic type
EXU85_31945 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_2
Ogg-HhH
HHH_3
HHH_8
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QDK82973
UniProt:
A0A515A878
LinkDB
All DBs
Position
7860670..7861323
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AA seq
217 aa
AA seq
DB search
MQKKERFRRFIEYFTEHYPEPKTELNFSNPYELLVAVILSAQCTDKRINQISPALFARFP
EAESLAAASADEVFTYIRSVSYPNNKAKHLVGMARTLMEKFEGEIPATVEELQTLPGVGR
KTAHVILSVVYNEPTMAVDTHVFRVSHRIGLAPLTATTPLAVEKALMAHIPKQYVPKAHH
WLILHGRYICLARAPKCEECALREFCKYYEKVIGARS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaagaacggttccggcgttttatcgagtacttcaccgagcattaccctgaa
cccaaaacggaactgaattttagtaatccctatgaattactggttgccgtaattttatcg
gcgcagtgtaccgacaaacggatcaatcagatttcgccagctttattcgcccgatttcca
gaagcagaatcattggcggcagcctcggccgatgaggtgttcacttatatccgtagtgtc
tcctaccccaataataaggcaaagcacttagtgggaatggccaggacgttaatggaaaag
ttcgaaggggaaattccggcaacagtcgaagaattacagacgttacctggtgtgggccga
aaaacagcccatgtgattttgtcggtcgtgtataatgaaccaacaatggcagtcgacacg
cacgtatttcgtgtttcgcaccgaattggtttggcaccacttacggccaccactccatta
gcagtcgaaaaagccctgatggctcatatcccaaagcaatacgttcccaaagcacatcat
tggctcattttgcatggccgttacatatgccttgcccgtgctcctaaatgcgaggagtgt
gcgttgcgagagttttgtaaatattatgaaaaagtaataggagcgaggagttag
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