Spirosoma sp. KCTC 42546: EXU85_33870
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Entry
EXU85_33870 CDS
T06164
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_33870
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_33870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_33870
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_33870
Transporters [BR:
spik02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EXU85_33870
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_33870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
DUF6518
Motif
Other DBs
NCBI-ProteinID:
QDK83324
LinkDB
All DBs
Position
8327956..8331051
Genome browser
AA seq
1031 aa
AA seq
DB search
MSLSGISIQRPVLAGVLSVLIILFGFVGLTYLGIREYPVTDSPIVTVTTTYPGASPDVIA
YQITKPLEEAIGEANGIRTISSVSREAASVVTIEFNLDADLEAAANDVRDKVTKARRLLP
GDVDPPIVEKANSGDIVIFMAVESKTRSILEVSNIASTVIKERMQTIPGVKRVGIAGEKK
YAMRLRIDPAKLAAYQLTPSDIEQALRKENVDLPSGRIEGDRNELTVRTLGRLTKEDDFN
NMIVKQEGSSIIRFRDIGYAELGAENERTAILNSLKGNSPTIGVFVEPQRGANAVAIADE
FYRRLKELRKEIPADYQLTIGKDFTEPIRDSISEVEETLFIAFGLVILILFLFLRDWRST
IIPVVAIPVSIVSAFFIMYVAGYSINILTLLALVLAIGLVVDDAIVVLENIYAKVEEGMS
PLQAAFKGSSEIYFAVISTTITLAAVFLPILFLPGITGKLFQEFAVVVAGSVIVSAFVAL
TLSPMMSAYLLKRHTKPNWLYRTTEPYFVTLNRGYEKSLGWFLRYRWVAFPTLIGTFGLI
YFIGKQLPSELAPLEDRAQISLAVIAPEGSSYEYTEKYMNEIAKFSVDSTQGLFQTYSIL
ALTFGPPAPVNVAIQNTFLKKADQRATTQADVFATYSRNAQNFRGVMVFPVQPPTIGSRF
GQSQPVQFVLQGTNLAAITDVLPKFMDEARKSPILRFADSDLKVNKPELVLQINRDKAAE
LGISVAEIARGLQLALSGQRYGYFIFNDRQYEVIGQLQRQDRDTPYDLKSMYVRTRTGDV
VSLDNLVSFKESISPAAIYRYDQAISATISAGLVPGKTIGDGVAEMNRIAQKVLPPTIKT
SLAGESRDFAESSSSLLYAFVFALILIYLILAAQFESLIDPFIILLTVPMAMTGALLSLW
IFDQTLNIFSQIGIITLIGLITKNGILIVEFANQSKEAGLSPLEAAKVAAASRFRPILMT
SLAMIFGTIPIALTENSRNSLGTVIVGGLLFAGLLTLYIIPAVYSYFSRVPKHREEEVGA
LEPIIDHAEAL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtcgggaattagtattcaacggcctgtgctggccggtgtactctctgtattg
attatactttttggtttcgttggactaacctatctgggaattcgggaatatcccgtcaca
gattcacccatcgttaccgttacaacaacctatccgggagccagcccggacgtaattgcc
tatcagattacgaagccactggaagaagcaattggcgaggccaacggcattcgaacgatc
tcatcggtatcgcgtgaagccgctagtgtagtcacgattgagtttaacctcgacgccgat
ctggaagccgcagccaacgatgtgcgtgataaagtgacgaaagcccgacgcttacttccc
ggcgatgttgatccgcccattgtggagaaagccaacagtggcgacatcgtaattttcatg
gcggtggaaagcaaaacccgcagcattctggaggtcagcaatattgcctcaacagttatt
aaagagcggatgcagaccattcccggcgtgaagcgggtgggtattgcgggtgagaaaaag
tacgccatgcggctccgaatcgacccggcaaaactggcggcctatcaattaacgccgtca
gatattgaacaggccctacgaaaagaaaacgtggatttaccgtcgggtcgtattgaaggc
gaccgaaacgagttgaccgtacgaaccctgggacgactcacgaaagaagacgatttcaat
aacatgatcgtcaagcaggaagggagcagcattatccgtttcagggatattggctacgcc
gaattaggtgcggagaacgaacgaaccgccattctgaacagtctgaaagggaattcgcca
acaataggcgtctttgttgaaccccaacggggagccaacgccgtagctattgccgatgaa
ttttaccgtcgactgaaagaattacggaaggaaattccggctgattatcaactaactatc
gggaaagacttcaccgaaccaattcgcgactcgatctccgaggtagaagaaacgctcttc
atcgcctttgggctggttatcctgattctgttcctgttcctgcgcgactggcgttcgacc
attattccggttgtggctattccggtttccatcgtatcagccttcttcattatgtatgtg
gctggctactctatcaacattttaacactgttagccttagtattggcgattgggctggtg
gtcgatgatgccattgtggtgctggaaaacatctatgcgaaagttgaagaaggcatgtcg
cctttgcaggctgcgttcaaaggatcatcggaaatctattttgccgttatctcaacaacc
attacactggctgccgttttcctgccgattttatttctgccggggattaccggtaagctc
tttcaggagtttgccgtggtcgtagcgggttcagtaatcgtgtcggcctttgtggcgctg
acgctttcgcccatgatgagcgcgtatctgctcaaacggcacaccaaaccgaactggctc
tatcgcacaacggaaccgtacttcgtgacgttgaaccgaggatatgaaaagtcgctgggc
tggtttctgcgctaccgatgggtggctttcccaacgcttatcggtacgttcggtttgatc
tacttcattggaaagcaacttccttctgaactggctcccctggaagatcgcgctcagatc
agtctggccgtgattgcgcccgaaggttcgtcgtacgagtacaccgagaagtacatgaac
gagatcgccaaattctcggtcgactccacgcagggtttgtttcagacctattccattctg
gcgctcacttttggaccacccgctccggtcaacgttgctatccagaataccttccttaag
aaagccgatcagcgggcaaccacccaggccgatgtattcgcgacctattcccgaaatgcc
cagaatttcagaggagttatggtgttcccggttcagccgccaacgattggtagccggttt
ggtcaatcccagcccgttcagtttgtgttgcagggtactaatctagccgccatcacagat
gtattaccgaagtttatggatgaggccagaaaaagcccgatccttcgctttgccgactcc
gatctaaaggtcaataagcctgagttggtacttcaaattaatcgagataaagccgccgaa
ttgggtatatccgttgccgaaatcgcccgaggtctgcaattggccttgagtggacaacgc
tacggctacttcattttcaacgaccgccaatacgaagttatcggtcagctccaacgccag
gatcgcgatacgccttacgacctcaaatccatgtacgtacgcacccgaacgggcgatgtc
gtttcgctggacaacctggtttcgtttaaagaaagcattagtcctgccgccatctaccgc
tacgatcaggcgatttcggcaaccatttcggcgggtctggtaccaggcaaaactattggt
gacggcgttgccgaaatgaaccggattgcccaaaaagtattaccgccaaccatcaaaacg
tcgttggcaggcgaatcccgcgactttgccgaaagctcatcgagtcttctctatgcgttc
gtgttcgcgctgattctgatctatttgatcctggccgcccagtttgaaagcctgatcgat
ccgtttattatcctgctcacggtaccaatggccatgacgggcgcactgctcagcctgtgg
attttcgatcagacgctcaacattttcagtcagatcggcatcattaccctaatcggtctg
attaccaagaacggtattctgattgtcgaattcgccaaccaaagcaaggaagcaggcctt
agcccattagaagccgccaaggtagccgcagcttcccggttccgccctatcctgatgacc
agtttggcgatgattttcggaacaattccgattgcccttaccgaaaacagccgcaactcg
cttggaaccgtgatcgttggcggactcctgttcgcgggtttgctgacgctctacatcatt
ccggcggtgtattcttatttctctcgcgtaccgaagcatagggaggaagaagtgggcgca
ttagagccaataattgatcacgcagaagctctttaa
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