Sardina pilchardus (sardine): 134059086
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Entry
134059086 CDS
T10667
Name
(RefSeq) guanine nucleotide exchange protein smcr8b-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134059086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134059086
Membrane trafficking [BR:
spil04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134059086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
134059086
NCBI-ProteinID:
XP_062371646
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All DBs
Position
2:1565811..1569872
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AA seq
894 aa
AA seq
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MIGSSDILALARGHEQTDSRTQQTSKLPDHLSLPPLPRPWHPGPAHHSDSVLLCEFRTGP
GPAVDRPEIRTGLQTEIGSGGIRIVSKTGIGTGLEPRLLFITPEPCPDVDLVLRLLTGGY
QATRGGGSYQAMRDGDRDQSDSWMLLGDGRSGVFVYAHYVPLVDQRARVAIALVSHDSLK
LVRELQELNKAFSQVSHTLHTTHTLKTKHIHTLTHTETTTVNDPDKHLHTHSHTHLETTG
VNNAHTHLHTESHTQIDTNQSGREEEREIREEEVEREGVERWRDEENKRRKEEMNRHKDE
SKRERKEERREDEEESNSSTHPEGAGLAEMGVGPGPMAESCDWFLSQQTVDSLCAIQVRF
CGDASLLVHQRECASLLSRLSTTNFLFEDPPPPQQHTSPSNPLHGNAADISCVEAVPIKL
EAEPEDRVNQSRGSPSAHVTTRPTWEEDDGVSMETGSHSSGDSIEVLATERSLRDDPVAM
ERSLRDDSVAVECSLRDDPVAMETSWNPSVQQPIALVSRWGAQRTDSQDSSIEVLSRDHS
FLWEDFRPADTLPHSLMGTVVQEEEEEEGDWQGDVGTVVQEEEDLTGTVGFFQNNAEQQR
FMGPVVQDNAEQQRFMATVVQECQFSLCTPTNPDLHHHDNMFQEACPLVGLLPLCPNGQK
DRDAALLSCASWRYGHDKGQAALRLVRNWGHAHQALFSLLTGRPLVVLGNDEERVRDLVL
ALELFLPNTHADTYTHTHADTHTPRVLPWCCRPIQITDLLEFGIIGLNRRFCQSSPSMPL
CLERYARYLSILDADHMTLQCPAYHGTLIGPLTKPQSQLREGRTYALLVQSSLTRLAARA
FHRVFTGHEAELSPGATDDIRILEYLCDIIKLRHTHHAPSSVLRFSYQPCTHFR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcctcggacatcttggctctggctcgcggtcatgagcagacggactctagg
acccagcaaactagcaagctgcccgatcacctctccctcccgcccttgccccgcccttgg
catcctggccccgcccaccacagtgattcggtgctactgtgtgagttcagaactggacca
ggtccagctgtggaccggcccgagatcagaactgggctccagactgagatcggaagtgga
gggatccggattgtaagtaagactgggatcggaactggactagagccgcggctactcttc
atcaccccagagccctgcccagatgtggacttggtgctacgcctcctgactggtggttac
caggcaacgaggggtggaggcagttaccaggcaatgagggatggcgacagggaccagagt
gactcgtggatgttgctaggcgacgggcggtcgggcgtgtttgtgtatgcacactacgtg
ccactggtggatcagcgagcccgtgttgccatagcgctggtgtcacatgactctttgaag
ctggtcagggagttacaggagctcaataaggcctttagccaggtatcacacacacttcac
actacacacacactcaagactaagcacatacacacactcactcacacagagacaacaacc
gtaaatgacccagacaaacaccttcacactcactcacatacacatttagagacaacaggc
gtaaacaatgcacacacacatttacacacagagtcacacacacagatagacaccaaccag
agtggcagagaagaggaaagagaaattagggaagaggaggtagagagagagggagtagag
agatggagagatgaagagaacaaaaggaggaaagaagaaatgaatagacataaagatgag
agtaaaagagagagaaaggaggagaggagggaagatgaggaggagagtaatagttcgact
catccagaaggggcagggttggcagaaatgggggtggggccagggcccatggcagagagc
tgtgattggttcctctctcagcagaccgtggactcgctctgtgccatccaggtgcgtttc
tgtggtgatgctagcctccttgtccaccagagagagtgtgcgagtctcttgtcccgccta
tccaccaccaacttcctgtttgaggacccgccccctccgcagcagcacacatctcccagc
aaccctctccatggaaatgctgctgacatctcctgcgtggaggcagtgccaatcaaactg
gaggccgagcctgaggatcgagtcaaccaatcacgtggctctcccagcgcccatgtgacc
accaggcccacatgggaggaggacgatggcgtttccatggagacaggcagccacagcagt
ggcgacagcatcgaggttctggccacggagcgttcccttagagacgaccctgtcgccatg
gagcgctcccttagagacgactctgtagcagtggagtgttcccttagagatgaccctgtc
gccatggagaccagctggaacccctctgtccagcagcccattgccttggtgagcaggtgg
ggagcgcagcgcacagacagccaggacagcagcatcgaggtgctgagcagagatcacagc
tttctgtgggaggacttccggcccgctgatacgctgccgcacagcctcatgggaactgta
gtccaagaggaggaggaagaggagggggattggcagggggacgtgggaactgtagtccaa
gaagaagaggacttaacagggactgtgggctttttccagaacaatgcagagcaacagagg
ttcatgggtcctgtagtccaagataatgcagagcagcagaggttcatggctactgtagtc
caagaatgtcagttctcactgtgcacaccaacaaacccggatttacatcaccatgacaac
atgtttcaggaagcgtgtcccctagttggactcctcccactttgccccaatggtcagaag
gatagagacgctgccctgctcagctgtgcttcctggcgttatgggcacgacaagggccaa
gctgcactgcgattggtgcgtaactggggacacgcccaccaggcactgttcagccttctg
actggccggccactggtggtgctgggaaatgacgaggagagggtgcgggatctggtgctt
gcactagagctcttcctgcccaacacacatgcagacacatacacacacactcatgcagac
acacacacacccagagtgttgccctggtgttgccggcccatccagataaccgacctcctg
gagtttggcatcataggactcaacagaaggttctgtcagtcctctcccagcatgccgctg
tgtctggagcgctacgctcgttacctcagcattctggacgccgatcacatgactctccaa
tgccccgcctaccacggcactctgattggtccactgacaaagccccaatcacagcttaga
gaaggcaggacttacgcgctgctggtgcagagttctctgacacgattggctgctcgagcg
ttccatcgcgtcttcacaggccatgaggcggagctgtctcccggggcgacggatgacatc
aggatcctggagtacctgtgtgacatcatcaagctgcgccacactcaccacgccccctcc
agtgttctccgattcagctatcagccgtgcacacacttcagataa
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