KEGG   Sardina pilchardus (sardine): 134059385
Entry
134059385         CDS       T10667                                 
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
  KO
K10260  F-box and WD-40 domain protein 7
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134059385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spil04131]
    134059385
   04121 Ubiquitin system [BR:spil04121]
    134059385
Membrane trafficking [BR:spil04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    134059385
Ubiquitin system [BR:spil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     134059385
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_SCAP WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EML_2 ANAPC4_WD40 F-box-like Beta-prop_Nup120_160 ASA1 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_EIPR1 CFAP251_N Beta-prop_NOL10_N Beta-prop_ACSF4 WD40_MABP1-WDR62_1st F-box Beta-prop_VPS8 Beta-prop_IFT140_2nd WD40_RFWD3 PQQ_2 Ge1_WD40 Beta-prop_IP5PC_F TRM82_WD Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_SPT8 eIF2A KNTC1_N Vts1 Beta-prop_RIG_1st PALB2_WD40 Beta-prop_pof12
Other DBs
NCBI-GeneID: 134059385
NCBI-ProteinID: XP_062371719
LinkDB
Position
16:complement(6225019..6279485)
AA seq 789 aa
MKQDLLLPGNTSTTASRGHQRRQRSAAPAATTTTTTTTTTIIAPPTSPGSTPSSSSNSSS
SSVRAGLEDGPEDEGLLDRAAAEEEEEGESEQGHDEGGEEVDEEEEEVVEDEEEGNELQQ
DDLEREGSEVGGENRSSHSEEAADEDNIEDNIEDNDGNSGHFAQELETEGQCGEEEHNEE
EEEEEEHDCYNSERSEVSLGEEDDEEEEEEGEMTEEDEERTDGMSSHTADGKTSDCPKGH
PSKRSSSSLLQMKRKLDQGEVRSFPSGKKPKGSDYSSPVGLVPYSASPTTFGDLRAANGQ
GHQRRRITLVPPPAGMQDWLRTFQTWSGPERLLALDELIDSCEPSQVKHMMQVIEPQFQR
DFISLLPKELALYVLSFLEPRALMQAAQTCRYWRILAEDNLLWREKCREDGIDEPLHVKR
RGLMKPCFIHSPWKSAYIRQHRIDTNWRRGDLRSPKVLKGHDDHVITCLQFCGNRIVSGS
DDNTLKVWSAITGKCLRTLVGHTGGVWASQMQDGTIISGSTDRTLKVWNAETGECVHTLY
GHTSTVRCMHLHGKRVVSGSRDATLRVWDVESGQCLHVLMGHVAAVRCVQYDGRRVVSGA
YDFNVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCVHTLT
GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKSFVV
TSSDDGTVKLWDLRTGEFVRDLVSLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLL
VLDFDVDMK
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgaagcaggacctgctgttgccgggcaacaccagcaccactgccagtagggggcatcag
aggcggcagcgatcagcagcaccggcggcaacgaccaccaccaccaccaccacaacgact
atcatcgccccgccgacctcgccaggcagcaccccctcttcctcctccaattcctcatct
tcctcggtccgcgccggactggaagacgggcccgaggatgaaggcctgctggatcgagcg
gccgccgaagaggaggaagagggagagagtgagcagggccacgacgagggaggagaagag
gtggacgaggaggaggaggaggtggtggaggacgaggaggaggggaacgagctgcaacag
gacgatttagagagggaggggtcggaggtcgggggtgagaaccgctcgagtcacagcgaa
gaagcggctgacgaggacaatatcgaggacaatatcgaggacaatgatggcaacagcgga
cattttgctcaggagttggagacggagggacagtgtggtgaggaagagcacaatgaggag
gaggaggaggaagaggagcacgactgctacaactctgagcgctctgaggtcagtttggga
gaggaagatgacgaagaggaggaggaagagggcgaaatgaccgaggaagatgaggaaagg
acagatgggatgtcgtcacacacagctgatggcaagaccagcgactgcccgaagggacac
ccaagcaaacgctccagctccagcctactccagatgaagaggaagttggaccaaggcgag
gtccgatctttcccttctggaaagaaaccaaagggctcagactattcgagccccgtgggt
ctcgttccatactcggcctcacccaccacattcggggacctgcgagcggccaatggacag
ggtcatcagcggcgacgcatcactctagtcccgcccccagctggcatgcaggattggctt
cgcaccttccagacgtggtcaggtcctgagaggctgttggctcttgatgagttgattgac
agctgcgagccgtctcaggtgaagcacatgatgcaggtgatcgagccacagttccagaga
gacttcatctcactgctgcccaaagagctggctctgtatgtgctgtcattcctggagccc
cgtgcattaatgcaggcggctcaaacctgccggtactggaggatcctggccgaggacaac
ctgctgtggcgagagaaatgccgagaggacggcatcgacgagccgctgcacgtgaagcga
cgaggcctgatgaagccgtgcttcatccacagcccctggaagagcgcctacatccgccag
caccggatagacaccaactggaggagaggggacctgcgctcgccaaaggtgttgaaaggt
cacgacgatcatgtgatcacctgcctgcagttctgtgggaaccggatagtcagtggctca
gacgacaacaccctcaaagtgtggtcagccatcactgggaagtgtctgcggacgctggtg
gggcacacgggcggcgtgtgggcgtcccagatgcaggacggcaccatcatcagcggctcc
accgaccgcacgctcaaggtgtggaacgccgagacgggcgagtgcgtgcacacgctctac
ggccacacgtccacggtgcgctgcatgcacctgcacggcaagagggtggtgagcggctct
cgggacgcgacgctgcgcgtgtgggacgtggagtcgggccagtgcctgcacgtgctcatg
ggccacgtggcggccgtgcgctgcgtccagtacgacggccggcgggtggtcagcggcgcc
tacgacttcaatgtcaaggtgtgggaccccgagaccgagacctgcctgcacacgctgcag
ggacacaccaaccgcgtttactcgctgcagtttgacggcatccacgtggtgagcggctcc
ctggacacgtcaatccgcgtgtgggacgtggagacgggcaactgcgtgcacacgctcacc
ggccaccagtccctgaccagcggcatggagctcaaggacaacatcctggtctcgggcaac
gccgactccaccgtcaagatatgggacatcaaaaccggacagtgcctacagactctacaa
gggcctcacaaacaccagagcgccgtcacgtgcctccagttcaacaagagcttcgtggtg
accagctcggacgacggcacggtcaagctgtgggacctgcgcacgggcgagttcgtccgc
gacctggtgagcctggagagcggcggcagcggcggcgtggtgtggcgcatccgcgcctcc
aacaccaagctggtgtgcgccgtgggcagccgcaacggcaccgaggagaccaagctgctc
gtgctggacttcgacgtggacatgaagtga

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