Sardina pilchardus (sardine): 134062225
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Entry
134062225 CDS
T10667
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134062225 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134062225 (irf5)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134062225 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
134062225
NCBI-ProteinID:
XP_062374155
LinkDB
All DBs
Position
17:complement(2310003..2316841)
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AA seq
519 aa
AA seq
DB search
MSIQPRRIRLKPWLLAQVNSGNYPGLQWLSKDHKLFQIPWHHATRHMPTPEEENTIFRAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFKLKYDGTKETPVQPYKIYEVCDQPCNG
DQEGEEDELPDIVNLSIDSRMNDPSSFQVFSAHRSDVPYPSPMNDFGPTHIIPAMTLLQD
SVQTTAGGTANMTAHLSQSAVAPQDFGRHMPIMGGVEQGMLAHSGPIVNGLPMDTGVIPN
PVLTEISTPAIPAVPMVESPMPGVQTVAAPQVQPCIYDLLSSPHVLPLTDLDIKFQYRGR
MAGSLTVSNPQGCRLYYGHLEPTPEQVDLFGPVYLNQVLFPGTAEIVNEKQKFYTDHLLD
VMDRGLVLEIRGQDIYAVRLCQCKVFWSGPGVPENGLPNPMEREKKFRVFSLNEFLHGLI
LYQKNEAPSLPPFEIYFCFGEDWPDKKPKEKKLIIVQVVPVVARILTEMFSGELSWSLDS
IRLQISNPDLKDQTVEQFKELQRLLQSQHGHNLRLYNQS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccaaccaaggaggatccgtctgaagccatggctgctggctcaagtgaacagt
gggaactatccagggctgcagtggctcagtaaggaccacaagcttttccagatcccctgg
caccatgctacccgtcacatgcccacaccagaggaggagaacactatatttagggcctgg
gccctggaaacaggtaagtaccaggagggagtggatgagccagaccctgccaaatggaaa
gccaacctacgctgtgctctcaataagagtcgagagttcaaactgaagtatgatggcacc
aaagagacacctgttcagccttacaaaatatatgaagtgtgtgaccaaccatgcaatgga
gatcaagaaggtgaagaagacgagctaccagacattgtaaacctctccattgactccaga
atgaatgatccctcaagttttcaagtcttttcggctcacagaagcgacgtcccttaccca
tcgcccatgaatgactttggccccacccatataatacctgccatgacgctcctgcaggac
agtgtccagactactgctggtgggactgccaacatgactgctcacctttcacagtctgcg
gtggcgccccaagatttcggtaggcacatgcccataatgggtggcgtggagcagggaatg
ttggcacacagcgggcccattgtgaatggactgcccatggatacaggggtcatacccaac
cctgtactcacagaaatctctactcctgccatccctgctgtgcccatggtggagagccca
atgccaggggtacagactgtagcagcaccccaagttcagccctgcatttatgacctgctg
agtagtccacatgtactacccttgactgatctggacattaagttccaataccgtggtcgg
atggctggttcacttactgtcagtaaccctcaaggctgccgactttactatggtcacctg
gagccaacacctgaacaggtggacttgtttggccctgtatacctcaaccaggtgctgttc
ccgggcacagcagagattgtgaatgaaaaacagaagttctacactgaccacttactggat
gtgatggatcggggattagtcctggagatccgtggacaagacatctacgctgtgcgtctc
tgtcagtgtaaagtcttctggtctggcccaggagttccagaaaatggtcttcccaatcct
atggagagggagaagaagttcagagtcttcagtcttaatgagttcttgcatggacttatc
ttgtaccaaaaaaatgaagccccttccctgccaccttttgaaatctatttctgttttgga
gaggattggcctgacaagaaaccaaaagagaaaaaactcatcattgttcaggtggtacct
gtggtggcaaggattcttacagagatgttctccggtgagctgtcctggtctttagatagc
atccggcttcagatttccaatccagacctaaaagaccagacggtggaacagttcaaagag
ctgcagagactgttgcagagtcagcatgggcataacctacgcctctacaaccagtcttga
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