Sardina pilchardus (sardine): 134063650
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Entry
134063650 CDS
T10667
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134063650 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spil04990
]
134063650 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
spil04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
134063650 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_TEN
DUF7630
Motif
Other DBs
NCBI-GeneID:
134063650
NCBI-ProteinID:
XP_062375262
LinkDB
All DBs
Position
18:18755099..18898192
Genome browser
AA seq
1784 aa
AA seq
DB search
MDMAWIRWNLLFSIGLFVSPAFVSMDQSGFRRYYVLQPGPSGSDRVHVSSISSRSGAAGQ
PQTYNVELTASFAGGQVRTRRMGNQATQSIPLRQDSQQQFTQQQIVRHTSHQVKVSGVNV
CGGQCCHGWSQAPGSQRCTKPHCLPQCQNGGMCLRPQLCICKPGSKGKACEQKAVPGPSN
PTLPGTGHTNGHTNGHTVGQGGNGHGNGHTNGQTVIQSGNGHPNGGRTTIHTVVPQRPIP
QQAYPPQPHGPAVVPGGANVAQMTVTMKRPQPYQTHVRSPVSVTMQRGQSHSQQFIMKPK
YYHTTHTQVHRVGPPPDRAIPLSVGHGHGTVHVPSAGNQTGRIKVVFTPTICKVTCMGGR
CQNSCEKGNTTTIISENGYATDTLTVSNFRVVVCHLPCINGGKCSARDKCQCPPNFTGKF
CQMPVQSGNHRQQQSQASQIHSTHTLPLTYNNGQKPVQFPPNFVNIHVKHPPEASVQIHQ
VSQLDANGQKVKGSQSSSTSTHRHTYQHSESSSSSSHSSSSSSHKVQQQGHAGVVYPNQQ
TYIHYQQPVTSKSQLGRCFQETTGAQCGKAFPGLVKQDDCCGTVGTSWGFHKCQKCPKKP
SLPQTDTRYQSECPQGYKKVNNSCQDVDECQQVQGLCPNGDCMNTQGSYRCICRAGFKPD
ATLSGCIPDTPAVPEEKGACFRMVGSGKQCLHPVSTQLSKQLCCCSVGKAWGPRCDKCPP
PGTALFKEICPGGMGYHVTGQIKPKPFNRPQQPQPQPQPQPYPQPQPRPRPPYQEPVLPP
VPLPTSHKPVEALSVTERQLPSVPVVTVAPEQELVFTDAGSSSVVDPGQPQLSPGISTIR
IEPPIQEVVEKTSPPEFFEIRPSSASQGIAPTQSSEVNECQVSPDICGHGICYNTPKGYT
CHCYEGYQLNEEQTTCVDVDECGERPLLCANGHCRNTAGSFQCACQHGFQTGDEGTSCVD
VDECLRPDACRDDDLCVNTPGSFLCRRCDRGFRMNPNGQCEDIDECLDRSNCPSGLCYNK
PGSFDCDPCPPGFEGKDGQCVDIDECLDTSACEHGRCSNFEGYFVCSCDDGYGLSPDGKS
CTDLDECQDDHVCTRGHCQNTEGSFMCVCEAGFRLSGAGDQCDDVDECRELPEVCGGVGV
CVNNLGSYLCSCSEGYQQVSGTSCQDVNECVDDPELCGANGECLNVEGSFQCVCDMGFTL
NQGTNTCEDVDECVQSIRCEGGTCVNTRGSYTCECDLGFRLQADNHTCQDIDECAELSPG
ICGAWRCENTLGSFTCVVSCPPGHTRDPQGVCVDIDECSQNETLCGSPDFCENLPGSYRC
HCDRGFEETPDGRGCVDLNECELLATVCGEARCENVEGSFMCTCPDENQEYDQMTATCVT
PTGSVERKECYYNLNDENLCDNVLTTSVTIQECCCTLGAGWGDNCEVHPCPIPGTDQFAK
MCPAGKGKVPSGDDVFGVASVDSFKDADECALFGSEICKGGFCLNQERTYECYCKAGLFY
DDVKLECIDTDECLDESNCVGGECMNTQGSYNCFCPPPMMLMEKRCVYTPPVAETREHQI
FQDVCWQTVTAMICNDVLPNKRTTYAECCCLYGEAWGMDCALCPEKDSEDYATMCNVPFS
GSRSRPYGRDALVAGPVQEYEVGVDYQPSPDYLPRPQIPEQTQGSHTLPLYEDEDPPYDA
FEGLRAEECGILNGCENGRCVRVQEGYTCDCFDGYTLDMSRMACVDVNECSELNSRMSLC
KNAKCINTQGSYKCQCLPGFVHSERPNYCVPKGQAPAAANDSRE
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcttggatcagatggaaccttttgttttccataggtttgttcgtctcaccg
gcgtttgtatccatggatcagagcggctttaggagatactacgtgttgcaaccgggaccg
agcggttcggacagggtgcatgtgagctccatttcatcccgctcaggagccgcaggacaa
ccgcaaacctataacgtcgaactaacggccagcttcgccggcggccaggttcgaacccgc
aggatgggcaatcaggcgacccaaagtatcccgctccgccaggactcacagcaacagttt
acgcagcaacagatcgtcaggcatacaagtcaccaagttaaagtatcaggggtgaatgtc
tgtggagggcagtgctgccacggatggagccaggccccgggatcgcagcgctgcaccaag
ccccactgtttgccccagtgccagaatggcggtatgtgtctgaggcctcagctctgcatc
tgtaagccaggctccaagggcaaggcctgcgaacagaaggccgtgcccgggccctccaac
cccactctgcctggcaccgggcacaccaacggccacaccaacgggcacaccgtgggccag
ggtggtaacgggcacggtaatggccacaccaacgggcagacggtcattcagagtggcaac
gggcaccccaacggcggccgcaccacgatccacacggtcgttccccagcggcccatcccc
cagcaggcgtacccgccacagccccacggtccggccgtggtgcccgggggtgccaacgtg
gcacagatgaccgtgaccatgaagcggccgcagccctaccaaacgcatgtgcgctcgccc
gtctcggtgaccatgcagcgcggccagagccacagccagcagttcatcatgaagcccaag
tactaccacaccacccacacccaggtgcaccgtgtggggccgccgccggaccgcgccatc
cctctgtccgtgggccacggccacggcaccgtccacgtgccctccgcgggcaatcagacg
ggccggatcaaggtggtcttcacccccaccatctgcaaggtgacctgcatgggcggccgg
tgccagaacagctgcgagaagggcaacacgaccaccatcatcagcgagaacggctacgcc
accgacacgctcacggtatccaacttcagagtggtggtctgccacctaccctgcatcaat
ggtgggaaatgcagtgcccgggacaaatgtcagtgcccacccaacttcaccggcaagttc
tgccaaatgcccgtccaaagcggcaaccaccggcaacagcagagccaggccagccagatc
cactccacacacaccctccccctcacctacaacaatggacagaagccggtgcagttcccg
cccaactttgtcaacatccacgtgaagcaccctcccgaggcctcggtccagatccaccag
gtgtcccagctggacgccaacggccagaaggtgaagggcagccagtcgtccagcacctcc
acgcaccgccacacctaccagcactcggagagcagcagcagcagcagccacagcagcagc
agcagcagccacaaggtgcagcagcaggggcacgccggagtggtctaccccaaccagcag
acctacatccactaccagcagcccgtcacctccaagagccagctgggccgctgcttccag
gagaccaccggggcacagtgtggaaaagccttccctggtctggtgaagcaggacgactgc
tgtggaacggtgggcacgtcctggggattccacaaatgccagaagtgccccaagaagccg
tcccttcctcagacagatacaagataccagagcgagtgccctcagggatacaagaaagtc
aacaactcctgccaagatgtggacgagtgccagcaggtgcaggggctgtgccccaacgga
gactgcatgaacacgcagggcagctaccgctgcatctgccgcgcgggcttcaagccggac
gccacgctgtcgggctgcatccccgacactcctgccgttccggaggagaagggcgcttgt
ttccgaatggtcggctcggggaagcagtgcttgcacccggtgtctacgcagctgagcaag
cagctgtgctgttgcagtgtgggtaaagcctggggccctcgctgtgacaagtgcccccca
cccggaacagctctcttcaaagagatctgccctggcgggatgggttaccatgtcaccggc
cagatcaagcctaagccattcaaccggccccaacaaccccaaccgcagccgcaaccgcag
ccatacccccagccccagcccaggccccggccgccctatcaggagccggtcctgcctcca
gtgcccctccccacttcacacaaacccgtggaggctctgagtgtgaccgagaggcaactt
ccttctgtaccagtagtcacagtggccccggagcaggagctcgttttcaccgacgctggt
agtagttcggtagttgatccaggacagccacagctttccccagggatttctaccattcgg
atagagccacccatccaagaggttgtggagaagacgtcccctccggaattttttgaaatt
cggcctagcagcgccagtcaaggcatcgctcccacccagtcttcagaggtgaacgagtgt
caggtgagccctgacatatgtggccatggcatctgttacaacacccctaagggctacacc
tgccactgctacgagggctaccagctgaatgaagagcagaccacctgtgtagacgttgac
gaatgtggcgagaggccgctgctctgtgccaacggccactgcaggaacacggccggcagc
ttccagtgcgcgtgccaacacggcttccagacgggtgacgagggaaccagctgcgtcgac
gtggacgagtgtttgaggccggacgcgtgccgggacgacgacctgtgtgtcaacacgccg
ggctcgttcctgtgccgccgctgcgacagaggcttcaggatgaaccccaacggccagtgt
gaagacattgatgagtgtctggacaggtccaactgtccatcaggtctgtgttataacaag
cctggctcgttcgactgtgatccctgtccacctggcttcgagggcaaggatggccaatgt
gtggatatcgatgagtgcctggacacctcggcctgtgaacatggccgctgctccaacttt
gagggctactttgtctgctcctgtgacgacggctacgggctgagccccgatggcaagtcc
tgcacagatttggacgaatgtcaggatgaccacgtgtgcactcggggtcattgccagaac
acagagggctcgtttatgtgtgtctgtgaggctggcttcaggttgtcgggtgcaggggac
cagtgtgatgatgtggacgagtgccgtgagctgccggaggtgtgtggtggcgtgggcgtg
tgtgtcaacaacctgggctcatacctgtgcagctgctccgaggggtaccagcaggtcagc
ggcaccagctgccaagatgtgaacgagtgtgtggatgaccctgagctgtgtggagccaac
ggggagtgtctgaacgtggaaggctccttccagtgtgtgtgtgacatgggcttcacttta
aatcaaggaacaaatacctgtgaagatgtggatgagtgcgtgcagagcatcaggtgtgaa
ggtggcacctgcgtgaacacccgaggctcatacacatgcgagtgtgatttgggcttccga
ctgcaggctgacaaccacacgtgccaggatatcgacgagtgtgcggagctgagcccgggc
atctgcggcgcgtggcgctgtgagaacacgctgggctccttcacctgcgtggtcagctgc
ccgcccggccacacccgagacccccagggggtgtgtgtggatatcgatgagtgcagtcag
aacgagaccctgtgcggaagcccagacttctgtgagaacctgcccggctcgtaccgctgc
cactgcgacagaggcttcgaggagaccccagatggccgaggctgtgtcgatctaaatgag
tgtgagctgctggccactgtgtgtggtgaggcgcgctgtgagaacgtggagggctccttc
atgtgcacgtgtcccgacgagaaccaggagtacgaccagatgaccgccacgtgtgtcacg
cccacaggctcggtggagaggaaggagtgctactacaacctgaacgacgagaacctgtgc
gacaacgtgctgaccacgagcgtgaccatccaggagtgctgctgcacgctgggcgctggc
tggggagacaactgtgaggtccacccctgccccatccccggcacagatcagtttgccaag
atgtgcccggcgggcaagggcaaagttcccagtggagatgatgtgttcggagtggcctca
gtcgattccttcaaagatgcggatgagtgtgccctcttcggctcagagatctgcaaagga
ggcttctgcctcaaccaggagaggacgtacgagtgctactgcaaggccggactcttctac
gacgacgtcaagctcgagtgcatcgacacggatgagtgcctggatgagtctaattgtgtg
ggtggggagtgtatgaacactcaaggctcctacaattgtttctgccctcccccaatgatg
ttgatggagaaacgctgtgtgtataccccacctgtggcagagaccagagagcaccagatt
ttccaggacgtgtgttggcagacggtgacggcgatgatttgcaacgatgtgctgcccaac
aagaggaccacgtacgccgagtgctgctgcctgtacggggaggcctggggcatggactgt
gctctctgcccagagaaggactcagaggactacgccaccatgtgtaacgtgcccttcagc
gggagcaggagcaggccgtacggtcgggatgcgttggtcgccggccccgtgcaagagtac
gaggtgggcgtcgactaccagcccagcccggactacttaccccgtccgcagattcctgag
cagacgcaaggctctcacaccctccccctctacgaggatgaagaccctccctacgacgcc
ttcgagggcctgcgagccgaggagtgcggcatcctgaacggctgtgagaacgggcgctgt
gtacgtgtgcaggagggctacacctgcgactgcttcgatggctacaccctcgacatgtcc
cgcatggcctgtgtggatgtgaacgaatgctccgagctcaacagccggatgtccctgtgc
aagaacgccaagtgcatcaacacgcagggctcctacaaatgccagtgtctgccgggcttc
gtccactcggagaggcccaactactgcgtgcccaaggggcaggcgccagcggcagccaac
gactcaagggagtga
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