Sardina pilchardus (sardine): 134066082
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Entry
134066082 CDS
T10667
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134066082 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134066082 (kdm2aa)
04121 Ubiquitin system [BR:
spil04121
]
134066082 (kdm2aa)
03036 Chromosome and associated proteins [BR:
spil03036
]
134066082 (kdm2aa)
Enzymes [BR:
spil01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
134066082 (kdm2aa)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
134066082 (kdm2aa)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134066082 (kdm2aa)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
134066082 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
134066082 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
Motif
Other DBs
NCBI-GeneID:
134066082
NCBI-ProteinID:
XP_062377243
LinkDB
All DBs
Position
2:complement(20957547..20981013)
Genome browser
AA seq
1357 aa
AA seq
DB search
MDESRPRYSKRLRSGTRRRYHDDGISDDEIEGKRTFDLEEKLRSDRFSSDRVRRLVGKEF
NFEYIQREGLRDPIIFERPDGLGIKMPDPDFSVNDVKSYVGSRRVVDVMDVTTQKNIEMS
MAHWRRYYETPHAQREKLYNVISLEFSHTKLENLVQRPATVDIIDWVDNMWPRHLKERQR
DSTNAIIDMQYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKATDCQRIELKQGYTFIIPSGWIHAVYTPVDTLVFGGNFLHS
FNIPMQLNIYGIEDRTRVPAKFRYPFYYEMCWYVLERYLFSLTNTSHLTPEFQKHSLGIG
LKRETSSEDGENLNGHTKEEDDEDDEKPPSPLIKPGVKVHLTAFELEGLWSLLGKLESLP
SHKKCVPAGIHNAPALLHDIRALLKEHAGDIPKLSYTGKPIVKWPRRPSWYQPPPPPAPV
GRPRLSSTVVTPRPVKPPSSMSVLRRRRVRCKRCEACLRTECGDCNFCRDMKKFGGPGKL
KQTCVLRQCLAPGLPLSAACEVCGEGNPEPGEAQTFSLMLMECSNCAQIAHPGCLKVPGD
GVVNKDLPSCWECPKCVLDQGNNSESSGSGDDGPASGSLLLLPAAQRLLAPEGPALGRHA
QGAGAVWRRAGRPPSSSSSPLPLAQGSPRQRAATLEQQRRLRKRIKLERKKIQMKRKSSS
LDGRPAKLYRRRGNEDDDDSGSDDDDDDEGLRPSGRKMSIHVRGGTSAGRRGYGAGRRGM
WRGTSHRGRGRGGGLAPSSGLKMRRGFGVRGERGGRVRLRGGARMQRRRYESDDDDDDDD
DDDDDDDDDDDDDDDDDESDEEHMSHTEKGHRRRRRRRRRRGDDDDDDDDDSDEDSEDRD
LDGEDEDMEDMDEDGEEKDDEDDDEDDDGNQTDSEPEPPVLLVSDLNDELLNGSYLTVTL
QRPTKAKRDPGSIVPKLEAAMSPRTPAGGHPGAGFVQRKTLHKARHKNNGGATGNGLAQS
KGGALAAGRHPRHGNHRHHHHHHGDRDTASPSSSASSRSSVSPTPPPPSSSASPPSLLSH
PSFREVGNEPGGEKEVWVSVFSYLTRTELSVCMTVCKAWYKWGCDKRLWTHIDLSRCRSL
TSQALSGIIKRQPVTLDLSWTPISKKQLSWLIHRMPGLKDLLVAGCSWLSVSALSSSSCP
YLRTLDLRWAEGVRDGQIKDLVTPQGSESRSRLRGMQTLRLSGLDISDSTLRLLLRHMPL
LQRLDLAHCRALTDQSINLLTATGSPTRHTLTELNLAGCHKLTDACLQSLKRASALQLLD
LRGCKGVTRRACESFISDLSYCTYFCMTDNKLIQRIS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatctcgcccacgatacagtaaacgactgaggtcaggcacgaggcggcgctac
cacgacgatggcatctcggacgacgagattgagggaaagaggacctttgacctggaggag
aagttgcggagtgatcgctttagctccgatcgggtcaggcggctcgtcgggaaagagttc
aactttgagtacatccagagagaggggcttcgtgaccccatcatctttgagaggccagat
ggactgggcatcaagatgccagaccctgactttagcgtcaatgatgtgaaaagttacgta
ggcagtcggcgggtggttgacgtgatggatgtgaccactcagaagaacatcgagatgtcc
atggcgcactggaggcgatactatgagacaccacacgcccagagggaaaagctatacaac
gtcatcagtctggagtttagccacactaagctagagaacctagtgcaacggcctgcaacg
gtggacatcattgattgggtggacaacatgtggccccggcacctgaaggagcgacaaaga
gactccaccaatgccatcatagacatgcagtaccccaaagtgcagaaatattgtttgatg
agtgtgcagggctgctacacagactttcacattgacttcgggggcacgtctgtctggtac
cacatactgcgaggaggaaaggtgttctggctgatcccacccacaccgcagaacctggag
ctctatgagaactgggtgctgtcgggcaaacagggggatatcttcctgggggacaaggcc
accgactgccagaggatagaactcaagcagggatacacattcatcataccatcaggctgg
atccacgcagtctacacgcctgtggacacgctggtctttggtgggaacttcctgcacagt
ttcaacatccctatgcagctcaacatctacggcatagaggaccgcacgcgggtccctgcc
aagttccgctacccgttctactatgaaatgtgttggtatgtgctggagaggtaccttttc
agcctgaccaacacatcgcacctgacaccagagtttcagaaacactctctggggattggt
ctgaagcgggaaacctccagcgaagatggtgaaaatctcaatggacacaccaaagaggaa
gatgacgaggatgatgagaagccgccctctcccctcatcaagcctggggtcaaagttcac
ctgactgcgtttgaactcgaagggctgtggagcctgctggggaagctggagtccctgccc
tcccataagaagtgtgtccctgctggcatacacaacgcacccgccctgctgcatgacatc
agggcactgctaaaggagcatgctggtgacatccccaaactatcttacactggaaaaccc
attgtaaagtggccaaggaggccctcgtggtatcagccccctcctcccccggcccctgtg
gggcgcccccgcctgtccagcacggtggtgacgccgcggccggtgaagccgccctcgtcc
atgtcggtgctgcggcggaggcgcgtgcgctgcaagcgctgtgaggcctgcctgcgcacc
gagtgcggcgattgcaacttctgcagagacatgaagaagtttggcggccccggcaagctc
aagcagacctgtgtgcttcgccagtgcctggcgcctggcctgcccctgtctgcggcgtgt
gaggtgtgtggggaggggaaccctgagcccggcgaggcccagaccttctccctcatgctc
atggagtgctccaactgtgcacagatcgctcaccctgggtgccttaaggtgccaggggac
ggagtggtaaataaagacctgcccagctgctgggagtgccccaagtgtgtcctggaccag
ggcaacaactccgagtcgtcgggcagcggcgacgacggcccagcgagcgggagtctgctc
ctgctgcccgcggcccagcggctcctggcgcccgaggggcccgcgctgggtcggcacgcc
cagggagctggggccgtgtggcgaagggcgggccgccccccttcctcctcctcctctccc
ctccctctcgcccagggctcgccacggcaacgggcggccaccctggagcagcagcggcgg
ctcaggaagaggattaagttggagcggaagaaaatccaaatgaaacggaagtcctcctca
ctggacggtcgtcccgctaagttgtatcgccggcgaggcaacgaagatgatgacgactcg
ggcagtgacgacgacgatgacgacgagggcttgcggccaagcggcaggaagatgtccatt
cacgtacgtggcgggacttcggctggtcgtcgtggttatggtgctgggaggcggggcatg
tggagaggcacctcccaccggggcaggggacgaggcggtggattggctcccagctctggg
ctgaaaatgaggcggggcttcggggtccgaggcgagagaggcggccgggttcgactccgg
ggtggagcaaggatgcagcggcgacgctacgaatccgacgatgacgacgatgatgatgac
gacgatgatgacgatgacgatgatgatgacgacgacgatgatgacgatgacgaaagcgat
gaagagcacatgagccacacagagaaagggcaccggcgacggcgaaggagacgtagacgg
agaggagacgacgacgacgatgacgatgatgacagcgatgaagacagtgaggaccgggat
ctggacggagaggatgaggatatggaggacatggatgaagatggcgaggagaaggacgac
gaagacgacgatgaagacgacgatggcaaccagaccgactcggagccggagccgcccgtg
ctgctcgtgtcggacctgaacgacgagctgctcaacggctcgtacctgacggtcaccctg
cagcggcccaccaaggccaagcgcgaccccggctccatcgtgcccaagctggaggccgcc
atgtccccgcggacgcccgccggcggccaccccggcgcaggcttcgtccagcgcaagacc
ctgcacaaggcgcgccacaagaacaacggcggcgccacgggcaacggcctcgctcagtcc
aagggcggagcgctggcggcaggcagacaccctcgccacggcaaccaccggcaccaccac
caccatcacggtgacagggacaccgcgtcgccgtccagctcggcgtcctcacgctcctct
gtgtcgcccacgccgcccccgccctcctcctccgcctctcctccctcgctcctctcccat
ccctccttccgggaggtggggaacgagccgggcggcgagaaggaggtgtgggtgtctgtg
ttcagctacctgacgcgtacggagctcagcgtctgcatgaccgtctgcaaggcctggtac
aagtggggctgtgataagcgtctttggacccacatagacctcagccgctgccgctctctg
acctctcaagccctctctggcatcattaagcgccagccagtgacccttgacctctcctgg
actcccatctccaagaagcagctctcctggctcatccaccgaatgccaggcctgaaggat
ctgctggtggccggctgctcctggctgtctgtgtcggcactcagctcctccagctgcccc
tacctgcgcaccctggacctgcgctgggccgagggcgtccgagatggacagatcaaagac
ctggtcacaccacaaggcagcgagtcacgcagccgattgcggggcatgcagaccctgcgc
ctgtccggtctggacatcagcgactcgacgctgcggctgctgctcaggcacatgcccctg
ctgcagcggctggacctggcccactgccgggccctcactgaccagtccatcaacctgctc
actgccacaggctcccccacccgccacaccctcaccgagctcaaccttgcaggttgtcat
aaactgaccgacgcgtgtctgcagtccctgaagcgtgcgtctgcgctgcaactgctggac
ctgcggggctgcaagggcgtgacgcggcgcgcctgcgagagcttcatctccgacctctcc
tactgcacctacttctgcatgacggacaacaagctcatccagaggatatcctaa
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