Sardina pilchardus (sardine): 134067441 Help Entry 134067441         CDS       T10667                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism spil  Sardina pilchardus (sardine) Pathway spil04115   p53 signaling pathway spil04145   Phagosome spil04148   Efferocytosis spil04350   TGF-beta signaling pathway spil04510   Focal adhesion spil04512   ECM-receptor interaction spil04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:spil00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     134067441   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     134067441  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     134067441    04148 Efferocytosis     134067441   09143 Cell growth and death    04115 p53 signaling pathway     134067441   09144 Cellular community - eukaryotes    04510 Focal adhesion     134067441   09142 Cell motility    04820 Cytoskeleton in muscle cells     134067441  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:spil04131]     134067441   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:spil00536]     134067441 Membrane trafficking [BR:spil04131]  Endocytosis   Phagocytosis    Opsonins     134067441 Glycosaminoglycan binding proteins [BR:spil00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    134067441 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS TSP1_CFP_C EGF_3 cEGF Amnionless EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  134067441 NCBI-ProteinID:  XP_062378705 LinkDB All DBs Position 20:1237147..1247520 Genome browser AA seq 1172 aa AA seqDB search MMLSALFLLLMLWNCEGVRLPAENRDDNSIYDLFELAHVPNKHHGVSLVKGPDPNSPAYK ILNPNLIPSVPDIAFRDIIDSIQTEKGFLLLATFKQAKKTRGSILVVEKKDGSGPIFEII SNGKANSLDLVYTTMNKQQVVSIDDSFLSTGGWKNITLFVQEDRAQLFVGCEEVNTAELD ASIHRILAQEITDIARLRIGKGAVKDRFMGVLQNVRFVFRTSLDAILRNMGCQSHNTFSE VITLDNPVNGSSPAIRTDYTGHKTKEVQGVCGFTCDDLNSMFNELKGLGLMVKKLTNELH EVTKDNQVIMSTMKIHSGVCLHNGIVYKDRDEWTVDACTECTCQNSATVCRRISCPLVPC QNATVPEGQCCPRCGEIDHEGAGWSPWSEWTQCSVTCGRGTQTRGRSCDRITNSCEGSSV QTRDCFLQECDKRFRQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKECQGEG RETKPCKEVQCPINGGWGPWSPWDTCSVTCGGGSQTRQRLCTDPAPKYGGKDCVGPPKEE QLCNTEKCPIDGCLSSPCFAGTKCTSFADGSFKCGACPPGYSGDGISCKDIDECKMVPDA CFVLNGVHRCENTEPGYNCLPCPARYSGPHPYGRGVEEATIKKQVCLPRNPCKDGTHDCN KHANCIYLGIFSDAMYRCECKPGYAGNGHICGEDSDLDGWPNRDLLCVANATYHCKKDNC PNLPNSGQEDYDKDGMGDACDDDDDNDGIPDDRDNCQFVFNPTQYDDDRDDVGNLCDNCP YEPNTDQIDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQTDSDSDRVGDKCDSNEDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDVCKDDFDQDNVLDIDDVCPENFAISETDFR RFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHHPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLTHRPKTGHIRVVMYEGKKIMADSGFI NDKTYAGGRLGLFVFSQEMVYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctcagcgcactgtttttacttttgatgctgtggaactgcgagggcgtcaggttg ccagcagaaaaccgagatgacaatagcatctatgatttgttcgaacttgctcatgtaccc aacaaacaccatggagtgagcttagtgaaaggtccagatccaaacagtcctgcttacaag attctgaacccaaacctgatcccctcagttcccgacatcgccttcagggacataattgat tccattcagacagaaaagggatttcttcttttggccaccttcaagcaagccaagaagacc aggggcagtatattggtcgtggaaaagaaagacggctccggacccatttttgaaataatc tctaacggcaaagcaaacagcttagatctggtatacactaccatgaacaagcaacaggtg gtgtccatcgacgattcctttctgtccaccgggggttggaagaacatcacccttttcgtg caggaagaccgggcgcagttgtttgtgggctgcgaggaggtcaacaccgcggaactagat gcgtccatccatagaatcctcgcccaggagatcactgatatcgccaggctgagaatcggg aagggagcagtgaaagacagatttatgggcgtgctccagaatgtgcgattcgttttcaga accagtcttgacgccatcctgcgcaacatggggtgccagagtcacaacaccttctcagag gtcataactttggacaatccagtgaatgggtcaagccccgccattcgcactgactacact ggccacaaaaccaaagaagtccagggcgtgtgtggcttcacttgtgacgacctgaacagc atgtttaatgagctgaagggactcggcttgatggtgaagaagctgaccaatgagctccat gaagtgactaaagacaaccaggttatcatgagcaccatgaagatccacagcggtgtgtgc ctgcacaacggcattgtctataaggaccgtgatgagtggacggtggatgcttgcaccgag tgcacgtgtcagaactctgccaccgtatgccggaggatctcctgtccactggtgccctgc cagaatgccaccgtgcccgagggacagtgctgcccccgctgcggagaaatcgatcatgaa ggtgcaggctggtccccatggtccgagtggactcaatgctccgtcacctgcggaaggggc acccagacccgtggacgctcctgcgaccgcatcaccaacagctgcgaaggctcatctgtg cagacccgtgactgcttcctgcaggagtgcgacaagcgcttccgacaggatgggggctgg agccactggtctccctggtcgtcctgctcagtcacctgcggagagggcgtcatcacccgc atccgtctctgcaactctcccaccccacagatgggaggcaaggagtgccagggagagggc cgtgagaccaagccctgcaaggaggtgcagtgtccgatcaatggaggctggggtccctgg tccccatgggacacctgctcagtcacctgcggtggtggatcccagaccagacagcgtctc tgcactgaccctgctcccaagtacggtggcaaggactgtgtgggcccacccaaggaagaa cagctgtgcaacactgagaaatgccccatcgatggctgtctgtccagtccctgctttgct ggaactaagtgcaccagttttgctgatggaagcttcaagtgtggtgcatgcccaccaggc tactctggagatggcattagctgcaaggatattgatgagtgtaaaatggttcctgatgcc tgcttcgtgctcaatggagtgcaccgttgtgagaacactgagcccgggtacaactgccta ccatgccccgcacgctactctgggcctcatccctatggcaggggcgtggaggaggctact atcaagaagcaggtttgtctgccacgcaacccttgcaaggacgggacccacgactgcaac aagcatgccaactgcatctacctgggcatcttctccgacgccatgtaccgctgcgagtgc aaacctggctatgctggcaatgggcacatctgcggcgaggactctgaccttgatggctgg cccaatcgggacctcctttgtgttgccaacgctacttatcactgcaaaaaggacaactgc cccaatcttcccaactcgggccaagaagactacgacaaagatgggatgggtgacgcttgc gatgatgatgatgacaatgatgggatccctgatgatagggacaactgccagtttgtcttc aatccaacacagtacgatgatgaccgtgatgatgttggtaacctctgtgacaactgccca tatgaacccaacacagatcaaatcgacactgacaacaatggagagggagatgcatgtgct attgacattgatggcgatggtattcttaatgagaaggacaactgcccctacgtgtacaat gttgaccagagggacactgacagagatggtgttggtgaccactgtgacaactgccctctt gaacacaaccctgaccagaccgactctgattcagaccgtgtgggagataaatgtgacagc aatgaagacatcgatgaggatggtcaccagaacaacttggacaactgcccctacattccc aatgccaaccaggccgaccatgacaaagatggcaagggagacgcgtgtgaccatgatgat gacaatgatggcattccagacgagaaggacaactgccgactagccttcaaccctgaccag attgattctgatggtgatggtcgtggagatgtttgtaaggatgacttcgaccaagacaac gtgctcgacattgatgacgtgtgtcctgagaacttcgccatcagtgagacagacttccgc aggttccagatggttccactggaccccacgggcacctctcagatcgaccccaactgggtg gttcgccaccagggcaaagagctggtgcagacagtcaactgtgatcctggcattgcagtt ggttttgacgagttcaacgctgtggacttcagtggcacctttttcatcaacactgaccgt gatgatgactatgccggcttcgtattcggctaccagtccagctcgcgcttctatgttgtc atgtggaaacagattacgcagacctactggtcccaccatccaaccaaagcacagggatat tctggcctgtccatcaaggtggtcaattccaccaccggaccaggagagcacctgaggaat gccctgtggcacaccggagacacccctggacaggtgcgcacactgtggcacgaccccaag aacatcggctggaaggactacactgcctacagatggcacctgacccacagacccaagact ggacacatcagagtggtcatgtatgaaggcaagaagatcatggctgattctggattcatc aatgacaagacatacgcaggtggaagactaggtctttttgtcttctctcaggaaatggtt tacttctcagacctcaaatacgaatgcagagattcataa

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