Sardina pilchardus (sardine): 134067441
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Entry
134067441 CDS
T10667
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04115
p53 signaling pathway
spil04145
Phagosome
spil04148
Efferocytosis
spil04350
TGF-beta signaling pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
spil04131
]
Endocytosis
Phagocytosis
Opsonins
134067441
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134067441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134067441
NCBI-ProteinID:
XP_062378705
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Position
20:1237147..1247520
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AA seq
1172 aa
AA seq
DB search
MMLSALFLLLMLWNCEGVRLPAENRDDNSIYDLFELAHVPNKHHGVSLVKGPDPNSPAYK
ILNPNLIPSVPDIAFRDIIDSIQTEKGFLLLATFKQAKKTRGSILVVEKKDGSGPIFEII
SNGKANSLDLVYTTMNKQQVVSIDDSFLSTGGWKNITLFVQEDRAQLFVGCEEVNTAELD
ASIHRILAQEITDIARLRIGKGAVKDRFMGVLQNVRFVFRTSLDAILRNMGCQSHNTFSE
VITLDNPVNGSSPAIRTDYTGHKTKEVQGVCGFTCDDLNSMFNELKGLGLMVKKLTNELH
EVTKDNQVIMSTMKIHSGVCLHNGIVYKDRDEWTVDACTECTCQNSATVCRRISCPLVPC
QNATVPEGQCCPRCGEIDHEGAGWSPWSEWTQCSVTCGRGTQTRGRSCDRITNSCEGSSV
QTRDCFLQECDKRFRQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKECQGEG
RETKPCKEVQCPINGGWGPWSPWDTCSVTCGGGSQTRQRLCTDPAPKYGGKDCVGPPKEE
QLCNTEKCPIDGCLSSPCFAGTKCTSFADGSFKCGACPPGYSGDGISCKDIDECKMVPDA
CFVLNGVHRCENTEPGYNCLPCPARYSGPHPYGRGVEEATIKKQVCLPRNPCKDGTHDCN
KHANCIYLGIFSDAMYRCECKPGYAGNGHICGEDSDLDGWPNRDLLCVANATYHCKKDNC
PNLPNSGQEDYDKDGMGDACDDDDDNDGIPDDRDNCQFVFNPTQYDDDRDDVGNLCDNCP
YEPNTDQIDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQTDSDSDRVGDKCDSNEDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDVCKDDFDQDNVLDIDDVCPENFAISETDFR
RFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHHPTKAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLTHRPKTGHIRVVMYEGKKIMADSGFI
NDKTYAGGRLGLFVFSQEMVYFSDLKYECRDS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcagcgcactgtttttacttttgatgctgtggaactgcgagggcgtcaggttg
ccagcagaaaaccgagatgacaatagcatctatgatttgttcgaacttgctcatgtaccc
aacaaacaccatggagtgagcttagtgaaaggtccagatccaaacagtcctgcttacaag
attctgaacccaaacctgatcccctcagttcccgacatcgccttcagggacataattgat
tccattcagacagaaaagggatttcttcttttggccaccttcaagcaagccaagaagacc
aggggcagtatattggtcgtggaaaagaaagacggctccggacccatttttgaaataatc
tctaacggcaaagcaaacagcttagatctggtatacactaccatgaacaagcaacaggtg
gtgtccatcgacgattcctttctgtccaccgggggttggaagaacatcacccttttcgtg
caggaagaccgggcgcagttgtttgtgggctgcgaggaggtcaacaccgcggaactagat
gcgtccatccatagaatcctcgcccaggagatcactgatatcgccaggctgagaatcggg
aagggagcagtgaaagacagatttatgggcgtgctccagaatgtgcgattcgttttcaga
accagtcttgacgccatcctgcgcaacatggggtgccagagtcacaacaccttctcagag
gtcataactttggacaatccagtgaatgggtcaagccccgccattcgcactgactacact
ggccacaaaaccaaagaagtccagggcgtgtgtggcttcacttgtgacgacctgaacagc
atgtttaatgagctgaagggactcggcttgatggtgaagaagctgaccaatgagctccat
gaagtgactaaagacaaccaggttatcatgagcaccatgaagatccacagcggtgtgtgc
ctgcacaacggcattgtctataaggaccgtgatgagtggacggtggatgcttgcaccgag
tgcacgtgtcagaactctgccaccgtatgccggaggatctcctgtccactggtgccctgc
cagaatgccaccgtgcccgagggacagtgctgcccccgctgcggagaaatcgatcatgaa
ggtgcaggctggtccccatggtccgagtggactcaatgctccgtcacctgcggaaggggc
acccagacccgtggacgctcctgcgaccgcatcaccaacagctgcgaaggctcatctgtg
cagacccgtgactgcttcctgcaggagtgcgacaagcgcttccgacaggatgggggctgg
agccactggtctccctggtcgtcctgctcagtcacctgcggagagggcgtcatcacccgc
atccgtctctgcaactctcccaccccacagatgggaggcaaggagtgccagggagagggc
cgtgagaccaagccctgcaaggaggtgcagtgtccgatcaatggaggctggggtccctgg
tccccatgggacacctgctcagtcacctgcggtggtggatcccagaccagacagcgtctc
tgcactgaccctgctcccaagtacggtggcaaggactgtgtgggcccacccaaggaagaa
cagctgtgcaacactgagaaatgccccatcgatggctgtctgtccagtccctgctttgct
ggaactaagtgcaccagttttgctgatggaagcttcaagtgtggtgcatgcccaccaggc
tactctggagatggcattagctgcaaggatattgatgagtgtaaaatggttcctgatgcc
tgcttcgtgctcaatggagtgcaccgttgtgagaacactgagcccgggtacaactgccta
ccatgccccgcacgctactctgggcctcatccctatggcaggggcgtggaggaggctact
atcaagaagcaggtttgtctgccacgcaacccttgcaaggacgggacccacgactgcaac
aagcatgccaactgcatctacctgggcatcttctccgacgccatgtaccgctgcgagtgc
aaacctggctatgctggcaatgggcacatctgcggcgaggactctgaccttgatggctgg
cccaatcgggacctcctttgtgttgccaacgctacttatcactgcaaaaaggacaactgc
cccaatcttcccaactcgggccaagaagactacgacaaagatgggatgggtgacgcttgc
gatgatgatgatgacaatgatgggatccctgatgatagggacaactgccagtttgtcttc
aatccaacacagtacgatgatgaccgtgatgatgttggtaacctctgtgacaactgccca
tatgaacccaacacagatcaaatcgacactgacaacaatggagagggagatgcatgtgct
attgacattgatggcgatggtattcttaatgagaaggacaactgcccctacgtgtacaat
gttgaccagagggacactgacagagatggtgttggtgaccactgtgacaactgccctctt
gaacacaaccctgaccagaccgactctgattcagaccgtgtgggagataaatgtgacagc
aatgaagacatcgatgaggatggtcaccagaacaacttggacaactgcccctacattccc
aatgccaaccaggccgaccatgacaaagatggcaagggagacgcgtgtgaccatgatgat
gacaatgatggcattccagacgagaaggacaactgccgactagccttcaaccctgaccag
attgattctgatggtgatggtcgtggagatgtttgtaaggatgacttcgaccaagacaac
gtgctcgacattgatgacgtgtgtcctgagaacttcgccatcagtgagacagacttccgc
aggttccagatggttccactggaccccacgggcacctctcagatcgaccccaactgggtg
gttcgccaccagggcaaagagctggtgcagacagtcaactgtgatcctggcattgcagtt
ggttttgacgagttcaacgctgtggacttcagtggcacctttttcatcaacactgaccgt
gatgatgactatgccggcttcgtattcggctaccagtccagctcgcgcttctatgttgtc
atgtggaaacagattacgcagacctactggtcccaccatccaaccaaagcacagggatat
tctggcctgtccatcaaggtggtcaattccaccaccggaccaggagagcacctgaggaat
gccctgtggcacaccggagacacccctggacaggtgcgcacactgtggcacgaccccaag
aacatcggctggaaggactacactgcctacagatggcacctgacccacagacccaagact
ggacacatcagagtggtcatgtatgaaggcaagaagatcatggctgattctggattcatc
aatgacaagacatacgcaggtggaagactaggtctttttgtcttctctcaggaaatggtt
tacttctcagacctcaaatacgaatgcagagattcataa
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