Sardina pilchardus (sardine): 134067835
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Entry
134067835 CDS
T10667
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134067835 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134067835 (c9orf72)
Membrane trafficking [BR:
spil04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134067835 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
134067835
NCBI-ProteinID:
XP_062379271
LinkDB
All DBs
Position
20:complement(7106422..7111863)
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AA seq
467 aa
AA seq
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MSSGCPPQSPAVAKTEVTVDGPCPLLAATFAYWDNILGPRVRHIWAPKQQAPDFSLLLSD
GEVTFLANHTLNGEILRSAESGAVDVKFFVLAEKGVLIVSLIFDGELKGDKNTCALSIIL
PQTELGFYLPLHNVCVERLKHIIRKARICMQKGFNIISVLTSEIIPIIELLSSMKTHSVP
EEVDIKDTVLNDDDIGDSCPEDFLKKAVSSHLQTCGCSMVVGSNPEKVNKMVLTLCLFLT
PTERKCSRLCQADGSSCRYDSGLFVQGLLKDATGSFVLPYRQVLYAPYPTTHIDVDINTV
KQMPPCHEHTYHQRRYQQAELSALWRAPSEELVGPDNSLTLPHDSFTPDLNIFQDVMHKD
TLVRSFIDEVFHLKPGLQLRNVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRSLK
TDLDLTVEGDLNIVMALAEKLRAGLHSFVFGKPFHTSVQERDLLMNF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggctgtccaccacaatcaccagccgtggcgaagacagaagtgacggtggac
ggcccctgtcccttgttggccgccacctttgcctactgggacaacatcctgggcccacgt
gtgcgccacatctgggccccaaagcagcaggcccccgacttcagcctgttgctcagcgat
ggcgaggtcactttcctcgccaatcacacactgaacggagagatcctccgcagtgcggag
agtggtgcggtagatgtgaagttttttgtcctggcagagaagggcgttctcatcgtatcc
ctgatctttgatggggagctgaagggtgacaagaacacttgtgccctgtcgattatccta
ccacagactgaactgggcttctacttgcccctgcacaatgtgtgtgtagagcgactcaag
cacatcatacgcaaggctcgaatctgcatgcagaagggtttcaacatcatctccgttctg
acttctgagatcatacccatcatcgagctcctgtcttctatgaaaacccacagcgtcccg
gaggaagttgatattaaagacaccgtgctaaatgatgatgatataggagatagctgccct
gaggatttcctgaagaaggctgtcagctcgcacttacagacctgtggctgctccatggtg
gttggcagcaacccagaaaaagtgaataagatggtgctgacactctgtctgttcctcacc
cccactgagaggaaatgctctcgcctctgccaagccgatggctcatcctgcagatacgat
agtggtttgtttgtgcagggccttctgaaggatgccacgggtagcttcgtgctgccgtac
cggcaggttctgtacgcaccgtaccccaccacacacatcgacgtggacatcaacacggtg
aagcagatgccgccgtgccacgagcacacgtaccaccagcgccgctaccagcaggccgag
ctgagcgccctgtggcgagcccccagcgaggagctggtggggcctgacaacagcctcacg
ctgccgcacgactccttcacgcctgacttgaacatattccaggatgtcatgcacaaagac
acactggtcagatcatttatagatgaggtgttccatttgaaaccagggcttcagctgcgc
aatgtctatctctcccacttcttgctgctcctccacaggaaagcactcacactgctgcgc
tacatagaggatgagactcagaagggcaagaagccgttccgatccctgagaagcctgaag
actgacctggacctgaccgtggagggcgacctgaacatcgtcatggccttggcagagaag
ctcagggctgggcttcactcctttgtgttcggcaagcccttccacaccagtgtgcaggag
cgcgacctactcatgaacttctga
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