Sardina pilchardus (sardine): 134069377
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Entry
134069377 CDS
T10667
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
spil Sardina pilchardus (sardine)
Brite
Cell adhesion molecules [BR:
spil04515
]
Cadherins
Protocadherins
134069377
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134069377
NCBI-ProteinID:
XP_062381324
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Position
21:complement(22624029..22629668)
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AA seq
1195 aa
AA seq
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MDVGCTTKHLGWTALGIVLLSLLWNVADAQTRYSIPEESKKGSVVGNLAKDLSISFSEIS
SSKLSIASENGKQYFSMDFKKGDLIVNERIDRESLCGQSSSCVLPVQVVIEEPLQLYRVE
VEIQDINDNSPEFHSNEHTLNVAENTLPGSKFPLEVARDADVGANSLKTYVLSKNEYFSL
NIITKKDGSKIPELVLDKTADREKEHTHSLILKAVDGGSPPRSGTTQITIKVLDANDNAP
VFEKSDYEIRVSENAPNGTKVLTVRAVDLDEGINGEVIYSFGSHTQGEVQNKFIIDPQTG
DILLIAPLDYEDASSYQFDVRATDKGVPVMEGHSRVRIDIVDVNDNAPEVVFTSPPKPVR
EDAAIGTVIALISTKDADAGDNGKVTIKMSSDYPFKLKPSFSDHYALVTDAKLNREEVQE
YNIELIAVDSGSPPLSSNAKVRVSILDVNDNPPSFTQPSYTVYVKENSEPGKIIADVSAI
DPDTGENAKVSYSILDSKAQDVTASSHVYINSDNGSIFSLHSFDYERLSVFQIRVQASDQ
GSPSLSSNVTVHVFILDENDNAPAIIYPSTAMGSLSHQKIPRSAKAGHLVTKVTAVDADS
GHNAWMSYKLAEATDESLFSVNVYTGEVRTRRAVSEEDDSTQTLLVEIRDNGVPSQSATA
TVSVLLEDGTHEPILDLQLTSPEPNKKTGRITFYLIVSLAAVSVLSLVTFFVLLVRCARH
SSSHSACCMRRMDSDDFRARNLQLQLNSDGPIKYVEVLGGDMLSHSQSFRSCLSPLSEFS
DFTLVKPSSTLDFKDMISVLDASLPDNAWTFESQQKSFVFSIQDVNDNPPAFTQPVYTVY
LDENSAAGKIVTSVSAVDPDTGENAKVSYSVLDTKENDVPISSYVYINSDNGSIYSMHSF
DYENLKAFHIRVQASDHGNPSLSSNATVHVFIVDQNDNAPTVIYPSGPMGSLSHQKIPRS
AKAGHLVTKVTAVDADAGHNAWMSYKLAEATDESLFSVNVYTGEVRTRRAVSEEDDSAQT
LLVEIRDNGVPAQSATATVSVLLEDGTHEPVSDLRQKDPEPIRKNGRIAFYLILSLASVS
VLSLITCLVLVVKCARSARRGSACCMRRMDSDDFRARNLQLQLNSDGPIKYVEVLGGDML
SHSQSFRSCLSPLSEFSDFTLVKPSSTLDFKDMISVLDASLPDNAWTFESQQVRQ
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggatgtacaacaaagcatttgggatggactgcacttggaattgtcttgctt
tcgttgttgtggaatgtagcagatgcgcagacacgctactctattccagaggagtccaag
aaaggctctgttgttgggaatttagcgaaggacctgagcataagcttttcggaaatatcg
agtagtaaattaagtatcgcctcggagaatggtaagcagtatttcagtatggactttaag
aagggcgatctgatcgtgaatgaaagaatagacagagaatcgctgtgtgggcaaagctcg
agttgtgtcttgccagttcaagtggtgatagaagagccactccagctttacagggtggaa
gtggaaattcaggacattaatgataactcaccggaatttcattctaacgagcacacgcta
aacgtggctgaaaacacattaccgggatctaagtttcctctagaagtagcgcgtgatgca
gatgtcggtgcaaattcattgaaaacatatgttttgagtaaaaatgaatatttttctttg
aatatcatcacgaaaaaggatgggtctaaaattcccgagctagttctagacaaaacagcc
gacagagagaaagagcatacgcatagtcttattctaaaagcggttgatggagggagtcct
cccagatctggcacaactcaaatcaccattaaggtgctcgatgcaaacgacaacgcgcca
gtttttgaaaaatcggactatgagatcagggtcagtgaaaacgcaccgaatggaaccaaa
gttttaacagtcagagctgtggatttagatgaaggtataaacggtgaggtgatatattcg
tttggctcgcacacacaaggagaggttcagaacaaatttatcatagatcctcaaacggga
gatattttactgatcgcgcccttagactatgaggatgccagttcttatcaatttgatgtc
agagcaactgataagggggtgccggttatggagggacacagtcgagtgcgtattgacatt
gttgacgttaacgacaacgcacctgaggtagttttcacctcccctcctaaacccgtcaga
gaagacgcagctataggcactgtaattgcattgataagcacaaaagacgcagatgcaggt
gacaatggaaaagttacgattaagatgagctctgactatccatttaaactgaagccttct
ttttcagaccattacgctttggttacagatgcgaaattaaaccgagaagaagtgcaagaa
tataatatagaacttatagccgttgactcgggttcccctcctctttcctcaaacgcaaaa
gtgagagttagtattttagacgttaacgacaatccaccgtccttcactcagccttcctac
accgtctatgtcaaagagaacagtgagcctgggaaaatcatagctgatgtttccgcaatt
gacccagacacgggagagaatgcaaaggtgtcctactccatactggactcaaaagcgcaa
gacgtgacggcctcttcgcatgtttacattaactcggataacggcagcatcttcagcctg
cattcatttgattatgagaggctgagcgtgtttcagattcgggtgcaggcgtcagaccaa
ggctctccctcgctgagcagcaatgtcacggttcacgtctttatacttgatgagaatgac
aatgcgcctgctatcatatacccgtctacggcaatgggatcgctctcacaccagaaaata
ccccgctccgctaaagcaggtcaccttgttactaaagtgacagctgtggacgcagactcg
ggtcacaacgcgtggatgtcttacaagttggcagaggctacagacgagtctctgttcagt
gtgaatgtttacacgggagaggtgaggactagacgcgctgtttcagaggaggacgactcc
actcagacactgctggtggagattagagacaacggggttccgtcccagtccgctactgct
accgtgtccgtattgttagaggacgggacccacgaacccattctggacctccagctgaca
tcgccagagccgaacaagaaaactgggagaattactttttatttaattgtctctctggcc
gcagtgtccgtcttgtctctggttacattttttgtcttgctagtaagatgtgcgcggcac
agcagcagtcattccgcctgctgcatgagacgcatggactcggatgacttcagagccagg
aacctgcagctgcagctgaactcagacgggcctattaaatatgtggaggtgctgggaggg
gacatgttgtctcatagccagtccttcaggtcctgtctctctcccctgtcggagttcagt
gacttcaccctcgttaagcccagcagcactcttgactttaaggacatgatcagcgtgtta
gatgcgtctctgcctgacaacgcctggacttttgagagtcaacagaaatcgtttgtgttt
agtatccaggacgttaacgacaaccccccagctttcacacagcccgtgtacacagtttat
ttggacgagaattctgcagcagggaaaattgtgacttcagtctctgctgttgatccagac
acgggagaaaatgccaaagtctcctattctgtcttggacactaaagagaatgatgtgccc
atctcttcctatgtttacattaactctgataacggcagcatctatagcatgcactcgttt
gactatgaaaatcttaaagcctttcacattcgagtgcaagcgtcagaccatggcaaccca
tctctaagcagcaatgccactgtccatgtttttattgtggatcaaaacgacaatgcgccc
actgtcatttacccatctgggcccatgggttcgctctctcaccagaaaataccccgctcc
gctaaagcaggtcaccttgttactaaagtgacagctgtggacgcggacgcgggtcacaac
gcgtggatgtcttacaagttggcagaggctacagacgagtctctgttcagtgtgaatgtt
tacacgggagaggtgaggactagacgcgctgtttcagaggaggacgactccgctcagaca
ctgctggtggagattagagacaacggggttccggcccagtccgctactgctaccgtgtcc
gtactgttagaggacgggacccacgaacccgtgtcagatctccggcaaaaagatccggag
ccaatcaggaaaaatggacgaatagccttttatttgattttgtctctggcctccgtgtca
gtgctatctttgatcacctgtctggtcttagtggtgaaatgtgctcgaagcgccagacgt
ggttccgcctgctgcatgagacgcatggactcggatgacttcagagccaggaacctgcag
ctgcagctgaactcagacgggcctattaaatatgtggaggtgctgggaggggacatgttg
tctcatagccagtccttcaggtcctgtctgtctcccctgtcggagttcagtgatttcacc
ctcgttaagcccagcagcactcttgactttaaggacatgatcagcgtgttagatgcgtct
ttgcctgacaacgcctggacttttgagagtcaacaggtgagacagtaa
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