Sardina pilchardus (sardine): 134070014
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Entry
134070014 CDS
T10667
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134070014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134070014
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spil04054
]
134070014
Membrane trafficking [BR:
spil04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
134070014
Pattern recognition receptors [BR:
spil04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134070014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
LRR_6
SHOCT_2
Motif
Other DBs
NCBI-GeneID:
134070014
NCBI-ProteinID:
XP_062382185
LinkDB
All DBs
Position
22:3802975..3810473
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AA seq
539 aa
AA seq
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MRCSLTEKSCAAIASAARSNSCSLKELNLSGNELHDAGVQHLSELLKNPRCKLEKLKVDG
RTFLKESPAAAAASASSSHSDAAELHLRDKVQQDPGAQLLSLDTHTEDHHMDAPQRSCKS
CAEVPDSSHWVLVKPEVSTEESVSTYILRVSPLTARSYECSESGLRWTCAGPVTLQYRFM
DWHLLADELPHMQYRPAGPSMDIKLMSGELEEIHLPHFLCLGSSLSSLKDAVKVLHKQDS
GVLIEKCELSRFHAKLMNPSFSLRGIFYSLMSLISQIKIHADVQVYWSRMVPLIFRTYLL
PMDKHLTKLVEDQEQLEGFRGFRLALPCPEEHLQLNDLYRLKTDCKSTIYPVERKLIEGS
FVPKFFKVRISKADDFKMELLSSVDSQQVWEAEILEMECWNKPQQDKSTLPSSSEAVNIP
TSVEQQTVNQAEVQRTERLRKPQQDNTHTVDETVEEFLKDKMAALIQRVTNVMPLADEML
SKDIIKREQYNNIKAELTDQGKMRCVFDALRSCGSPEKSLFFKILLSQHSSLLRELGWD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttccctcacagagaagagctgtgctgcgatagcgtcagctgccagatcaaac
tcctgcagtttgaaggagctgaacctgagtggcaatgagcttcatgatgcaggagttcag
catctctcagagctcctcaagaatccccgctgcaaactggagaaactaaaagtggatggt
cgtaccttcctgaaggagagtccagcagcagcagcagcctctgctagcagctcccactca
gatgctgcagagctgcacctcagagacaaagtccagcaggacccaggagcacagctgctc
tctctggacactcacacggaggatcaccacatggatgccccacagaggagttgtaaatcc
tgtgctgaagttccagactccagccactgggtcctggtgaagcctgaagtctccacagag
gagagcgtctccacctacatcctgagagtgtctccacttacagcaagaagttatgagtgc
tcagagtctggtctgcgctggacgtgtgctggtccagtcaccctgcagtaccgcttcatg
gactggcatctcttggctgatgagctgccccacatgcagtacagaccagctggcccttca
atggacatcaagctcatgtcaggagagctggaggagatccacctgccacatttcctctgt
ttgggaagtagtctgtcttctctgaaggatgctgtgaaggttctgcataagcaggacagt
ggagtgttgatagagaagtgtgagctgagtcgcttccatgccaaactgatgaacccctcc
ttttctcttcgtgggattttctactctctaatgtctctcatctctcagattaagatccat
gcagatgtccaggtctactggagcaggatggtacccctcattttccgcacatacctgctg
cctatggataagcatctcacaaagttagtggaggatcaggaacaattggagggattcaga
gggttcagacttgctttgccttgtcctgaagaacatcttcagttgaatgacttatatagg
ttaaaaactgactgcaagtctacaatttatccagtagagcggaaactcatagagggcagt
tttgttcccaagttctttaaggtgcgcataagcaaggctgacgacttcaagatggagctc
ctcagctctgtagacagtcagcaagtctgggaagcagagatcttggaaatggaatgctgg
aacaaacctcaacaggacaagtccacactcccaagctcatctgaggccgtcaacatccca
acctctgtggagcaacagacagtcaaccaagcagaagtccagagaactgaacgattgcgg
aaacctcagcaggacaatactcacacagtagatgaaactgtagaagagttcctcaaagac
aaaatggcagcgctcattcagagggtgaccaatgtgatgcctctagcagatgagatgctg
tcgaaagacatcatcaaaagagaacagtacaacaacatcaaagcggagctcactgaccag
ggcaagatgaggtgtgtgtttgatgccttgcgctcttgtgggtctcctgaaaaaagtttg
ttcttcaaaatccttctgagtcaacactcttccctgctgagagagttgggctgggattga
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