KEGG   Sardina pilchardus (sardine): 134071127
Entry
134071127         CDS       T10667                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04145  Phagosome
spil04514  Cell adhesion molecules
spil04672  Intestinal immune network for IgA production
spil05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:spil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    134071127
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    134071127
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    134071127
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    134071127
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134071127
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134071127
  Exosomal proteins of epithelial cells
   134071127
  Exosomal proteins of breast milk
   134071127
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 C2-set_3 Ig_3
Other DBs
NCBI-GeneID: 134071127
NCBI-ProteinID: XP_062383711
LinkDB
Position
23:complement(13904113..13906598)
AA seq 259 aa
MSCSDLMMCTCLLLLVYLLLGVDGYCQYRWRRCYSKSIDLTDMVYVESYFYNKMEFLVFN
STVGWYVGYSGLGMRLANQKNQDKFLLPFQRGAVDRLCKQVNAQVYKSYGSQIKVEPKVK
LSLDRPSSDHHPGMLVCSAYNFYPKMIHVNWYRDGRKVTNHVSATEELGDGDWFYQIHSH
LEFTPKPGEKITCVVEHASFKEPREFVWEPSMDEAERNKMAIGAAGLVLGLVVCAAGLLY
YRKSSQGWMMAPVRTASTS
NT seq 780 nt   +upstreamnt  +downstreamnt
atgtcctgctccgacctgatgatgtgtacttgcctactgctgctagtgtatctactcctt
ggagtagatggatattgccagtacagatggcggcgatgctactccaaatcgatagatttg
actgacatggtttatgtagagtcatacttttacaataaaatggaattcttagtgttcaac
agcactgttggttggtatgtgggctattcaggtcttggcatgcgtttagcaaatcagaag
aatcaagataaattcctcctgccatttcagcgcggcgctgttgacagactctgcaaacaa
gtcaatgctcaggtctacaaaagctatggaagtcaaataaaagttgagcccaaagtgaag
ctgagtttggaccggccttccagtgaccatcaccctggcatgctggtgtgcagtgcgtat
aacttctacccaaagatgatccacgtgaactggtacagagatggtcggaaggtgaccaac
catgtctcggccacagaggaactgggggatggagactggttctatcagatccactcccac
ctggagttcacccccaaacctggagagaagatcacctgcgtggtggagcatgctagcttc
aaggagcccagagagtttgtctgggagccctccatggacgaggcggagaggaacaagatg
gccattggagctgctggactggtgctgggactggtggtctgtgctgctggactgctctac
tacaggaagtcgtctcaagggtggatgatggctcctgtaagaacagcctctacttcatga

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