Sardina pilchardus (sardine): 134078000
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Entry
134078000 CDS
T10667
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 2-like
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134078000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134078000
Enzymes [BR:
spil01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
134078000
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134078000
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SIDD_N
OB_NTP_bind
Motif
Other DBs
NCBI-GeneID:
134078000
NCBI-ProteinID:
XP_062389615
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Position
4:12822702..12834777
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AA seq
1141 aa
AA seq
DB search
MREVPTDAFGDINFGSQNMAKYVRVSSDTPSHDLYHLITKYWKLDPPNLLISVRGGTKNF
NMRPHLKRKFHRGLIKVAQSTGAWIITGGTHTGVMKEVGMAVRDNTLSSSSAWGKIVAIG
VAPWGTVHNSKSLVHPEGRFPAHYTLDEKSQGRLSCLDSNHSHFLLVDDGTHGHYGVEIG
LRSRLEKLVADQPLGNRLRKNQKSHLKIPAVCILLNGGQGSLNTIYSAMLSGTPCVVLEG
SGRMADVIANVAGKPVSQVTLALIQTQMKRFFGQEYDDISDIKWAKKIQDIIRMPHLLTV
FSMDEYKHSDVDVAILQACLKASRNEENVKQRGCERQLELAVAWSRLDIAKGEILTEESQ
WESSDLHKAMFSALVGHKSEFVRLLLENGVSIPQFLSGDKALLKLYNAMPSCLFRRKLVM
QIQGNKNGRKQVSLAEVAVVVRQLLGNFTQPVYSPSDEFIKMADDNAVIVSLKCQEINEN
NCHXSRXWTHSGYYNPGRDLFLWAVLQNNRELAQIAWEKCRDSTAAALAASKILKKLAEE
SESNDEDGANDMKELAYHFEKQAIGVFSQCHSNSKDDQQRAQRLLLRISPSWGNTTCLLL
AVEADDKSFVAHSGVQAHLTQIWCGELAVDTPLWRLLLCMLFFPLIYTGFITYRCDEDIK
KEATKRQMFLMESETGSWADTRDLCSSSDPQDTDQLKPLSCLDRLGSFYTAPRVKFFLNI
ASYFGFLVLFAYVLMVDFQPMPSWKEWLLYVWVISLVSEELRQLFDDPNGFEFRKKAKMY
IVDVAAVLLFIPGLACRLALSLRLWISQTFYVGKIILCLDFVFFCLRLVAIFIISKTLGP
KIIIVKRMMVDLFLFMSLLSIWVVAYGVANQGIVIHNEERLSWVIRGALYDPYLLVFGNV
ATDINNDFDINTCTVDGSDPLLPKCPLLNADQMPAYPTWLTTIMLCIYLLFAQILLLNLR
IAIFNYVFQDVQDNTDAIWKFQRYELITEYYGRPTAPPPFILFSHLFLLFKRFVMRCCCP
IKSKWLCDAEEEEELMSWEAFMKDKYVAAQRQERSESTEQRLGQLEEQVSQSAKALQRIM
DTLKAQGYQSKQEPPSMPRSTESEGDEHEIDGDPEKRQHHFHAQRSWGAGDIYIKKRGTK
F
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggttcccaccgatgcctttggagatataaactttggaagccaaaacatggcc
aagtatgtacgtgtctcctcagacaccccctcccatgatttgtaccacctgattacgaaa
tactggaagctcgaccccccaaacctgctcatctcggttaggggcggaaccaagaacttc
aacatgaggccgcatctgaagcggaagttccacaggggcctcatcaaagtggcccagagc
acaggtgcctggatcatcaccgggggcacccacactggggtgatgaaggaggtggggatg
gctgtgcgtgacaacaccctcagtagcagctctgcgtgggggaagatcgtggccattggg
gtggccccctggggcactgtacacaacagcaagtcccttgtgcaccctgagggccgtttc
cctgcccactacacactagacgagaagagccagggtcggctctcctgcctggacagcaac
cactcgcacttcctgctggtggacgacggtacgcacggccactacggcgtggagatcggc
ctgcgcagccgcctggagaagctcgtcgcagatcagcccctgggaaaccgactcaggaaa
aatcaaaaaagtcatttgaagatccctgctgtgtgcatattattgaacggaggacagggc
tctctgaataccatctacagtgccatgctgagcggcaccccgtgtgtggttctggagggt
tcgggccggatggcagacgtgatcgctaacgtggccgggaagcccgtatcgcaggtcacc
ctggctctgatccagacacagatgaagaggttctttggacaggagtatgatgacatctcc
gatatcaagtgggccaaaaagatccaggacatcatcaggatgccacatctcctgactgtg
ttcagcatggacgagtacaagcacagcgatgtggatgtggctatcctccaggcctgcttg
aaagcgtccaggaatgaggagaacgtaaagcagaggggttgtgagaggcagctggagctg
gctgtggcctggagtcggctggacattgctaagggcgagatcttgactgaggagagccag
tgggagtccagcgacctgcacaaggccatgttctcggccctggtgggccacaagtcggag
tttgtgcggctgctgctggagaacggcgtgagcatcccccagttcctgtccggggacaag
gcactgctcaagctctacaacgccatgcccagctgcctcttccggcgcaagctggtcatg
cagatacagggcaacaagaacgggcggaagcaggtgtctctggcagaggtggctgtggta
gtgcgccagctactgggcaactttactcagcccgtttactcgccctcggatgagttcatc
aagatggccgacgacaatgctgtgattgtaagtctgaagtgtcaagagataaatgaaaat
aactgtcattgatctagataatggacgcacagtggatactacaaccctgggagagacctc
ttcctgtgggctgttctacagaataacagagagctggcccagattgcctgggaaaagtgt
agagacagcacagctgctgctttggctgccagcaaaattctgaaaaagctggcagaggag
tcagagagcaatgatgaagatggtgccaatgacatgaaagaacttgcctaccactttgag
aaacaggccattggtgtgttcagtcagtgccatagcaatagcaaagatgaccagcagcga
gcccagagacttctgctccgaatctcaccatcttggggcaacaccacatgtctactcttg
gcagtggaggcggacgacaagagctttgtggctcactcaggggttcaggctcatctcacc
cagatctggtgtggagagctggctgtggacacccctctgtggaggttactcctctgtatg
ctgttcttcccactcatctacacaggcttcataacctacagatgtgatgaggacattaaa
aaggaggccacgaagaggcagatgtttttaatggagtctgagacaggaagctgggccgat
accagagacctctgctcctccagcgatcctcaggacactgaccagctaaagccactgagt
tgcctagacaggctggggagcttctacacagctccacgggtgaagttcttcttgaacatt
gcctcctactttgggttcctggtgctctttgcctacgtgctgatggttgacttccagccc
atgccgtcatggaaggagtggctgctctacgtttgggtgatctctttagtatctgaggag
ctccgacagctttttgatgatccgaacggatttgagttccggaaaaaagccaagatgtat
attgttgacgtggccgccgttcttctcttcatccctggtcttgcctgcaggttggctttg
agtctcagactgtggatcagccaaacgttttatgtgggaaagatcatcctctgcctcgac
ttcgtctttttctgtctgcgactggttgccatctttatcattagcaaaaccctgggccca
aaaatcataattgtcaaaaggatgatggtggatctcttcctcttcatgtccctgctcagt
atctgggtggtggcctacggggtggctaatcagggcattgtgattcacaacgaggagaga
ctgagctgggtcatcagaggtgctctgtatgatccttacctcctcgtattcggcaatgtc
gcaaccgacatcaacaatgactttgacataaacacctgcactgtggatggctctgaccct
ctgctgccaaaatgccctctgctcaatgccgaccaaatgccagcctatcccacgtggctg
accaccattatgctgtgtatttaccttctctttgctcaaatcttgctcctcaaccttcgc
attgccatcttcaactacgtatttcaggacgtgcaggacaacaccgatgcaatctggaag
ttccagaggtacgagctgattacggaatactacggtcgccccactgcgccccctcccttc
atcctcttcagccacctgttcctgctgttcaagcgctttgtgatgcgctgctgctgcccc
atcaagagtaagtggttgtgtgatgctgaggaggaggaggagttgatgtcatgggaggct
ttcatgaaggacaagtacgtggccgcccagcgccaggagaggagtgagagcacggagcag
cgcctgggtcagctggaggaacaggtctcccagtccgctaaagcactgcaacggatcatg
gacaccctaaaagcccaaggttaccaatctaaacaggagcctccttccatgcccaggagc
acagagagtgaaggagatgagcatgagattgatggtgatccagagaagagacagcaccac
ttccacgcccaaaggtcctggggtgcaggagatatttatatcaaaaagagggggaccaaa
ttctga
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