Sardina pilchardus (sardine): 134078690
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Entry
134078690 CDS
T10667
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134078690 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
spil03310
]
134078690 (nr1i2)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134078690 (nr1i2)
Nuclear receptors [BR:
spil03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
134078690 (nr1i2)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Pox_A12
RAP1
Motif
Other DBs
NCBI-GeneID:
134078690
NCBI-ProteinID:
XP_062390779
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Position
4:25461119..25479543
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AA seq
417 aa
AA seq
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MSEEEEQLQAKGSEEEEEEGEEEDEESKICQVCGDQANGYHFNAMTCEGCKGFFRRAMKR
PATFRCPFQKNCVITKNNRRQCQACRLQKCLSIGMRKEMIMSDQAVEERRWKIKRKRLMA
EPMLLSTQQEKLILELSTALEQTFDRTCSSFHQFSPLDRNADSVNNQTQQSSTSNSVASE
ESDRNSSSEGPGSSSSSSSSSSSSVTCDTGQAPGEKKTVFTSLSHVNDLSTYMIQNVINY
AKIINAFRALTIEDQISLLKGATFEIVQIRFNRLFNVKTGIWECGTLHYCMDDAFRAGFQ
PHLLDPLLKFHYTLRGLELHDIEYTLMETISLFSPDRPGVTNRDVISCYQENLAVTLLTY
IESKRTDSEKHLLFPKIMACLTEMRTMNEEYSKQVMQIQDIQPELSPLILEVVSQDS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaggaggagcagcttcaggcgaagggctctgaggaggaggaggaggagggg
gaggaggaagacgaggagtctaaaatatgccaggtgtgcggggatcaggccaacggctac
cacttcaatgcaatgacctgtgaaggttgcaagggcttctttagacgggctatgaagagg
ccagccaccttccgctgccctttccagaagaattgtgtcatcaccaagaacaaccggcgg
cagtgccaggcctgtcgcctgcagaagtgtctctccatcggcatgaggaaggagatgatc
atgtcggaccaggcggtggaggagcggcgctggaagatcaagaggaagaggctgatggcc
gagcccatgctgctgtcgacccagcaggagaagctcatcctggagctgagcacggctctg
gagcagacctttgaccgcacctgctccagctttcatcagttcagccccctagataggaat
gcagactcagtcaacaaccaaacacagcagagctctacgtctaactcggtggcgtcagaa
gagagtgaccgcaactctagctccgaaggtccaggctcctcgtcctcatcctcatcttcg
tcttcgagctccgtgacgtgtgacactgggcaggcgccaggcgagaagaaaacggtcttc
acctcgctgtcgcacgtcaacgacctcagcacatacatgatccagaacgtcatcaactac
gccaagatcataaacgccttcagggctctgacgatcgaagaccagatctcgctactcaaa
ggagccacgtttgagatagtgcagatccgcttcaacaggctcttcaacgtcaagacgggt
atctgggagtgcggcaccctgcactactgcatggacgatgcctttcgggcgggtttccag
ccccacctgctggaccctctgttgaagttccactacacactgcggggccttgagctgcat
gatattgagtacacgctaatggagaccatctccctcttctccccagaccgccctggggtc
acaaaccgtgacgtcatcagctgttaccaggagaacctggccgtcaccctgctgacgtac
atcgagtccaagaggacggacagtgagaaacacctgctgttcccaaagatcatggcgtgc
ctgacggagatgcgaacaatgaacgaggagtacagcaagcaggtgatgcagattcaggac
atccagccagagttgtccccactcatcctggaggtggtcagccaagacagctaa
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