Sardina pilchardus (sardine): 134079815
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Entry
134079815 CDS
T10667
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04110
Cell cycle
spil04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134079815 (rb1)
04218 Cellular senescence
134079815 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spil01009
]
134079815 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134079815 (rb1)
Protein phosphatases and associated proteins [BR:
spil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134079815 (rb1)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
134079815 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
AlkZ-rel
Motif
Other DBs
NCBI-GeneID:
134079815
NCBI-ProteinID:
XP_062391884
LinkDB
All DBs
Position
5:1246361..1310516
Genome browser
AA seq
916 aa
AA seq
DB search
MPPKKRTPQNKEIKQNITSSDNHNVKSPSKNSDDSVVSTPKHRDKEADFVSLCKDLQVTN
SLCNHAWSIWRKVSESTEKMPDTNRKMWAACLFVAGIDMDAPSPGFTQVQKAAGLNVKQF
LEVMRNLDVNIDIISAKVNSAVSKLEKKYDVSLALYQRFEKIWKDIYMEPSESESNEIFR
SVWSMFILAKGRFLQMEDDLVISFLLLICVLEFFLKRSPPSLIKPLYSAKMTPTRSSRRN
HGKAKPRPPEANEPLLEVICRENECNLDEVKNVYETVFSPFLESSGFSKSQDLPKFEELS
AKFEEVFLKTKDFDGRLFLNGEEKCSQEKTDTGHVESTPKKLVSAEEFNPAILQTPVRAT
LYSVQQLRVSLTSASDQPSDTLMTYFKNCTVDPTEAVVERAQRLGALFGQAFAQVVSPGC
SGLGNQRFALGVRLYYRVMESMLKSEEKRLSVHNFSKLLNDSTFHTSLLACSLEVVMATY
GSGLSTDTDLSFPWLLGVFQLHGFDFYKVIESFIKAEASLHRDMVKHLERCEHLIIESIA
WRTDSPLFELLQRAGEEGRLETAEPPATFHQPPQHSHTAADLYLSPVRPSRSVPPVQDPS
PPRVTPPPSAPARSPPTTAPPPAAPTQPSRPPRSNSLGHFYKKLYRVAYLRLKMLCTRLL
SDHAELEPIIWTLLQHTLKDEHELLRDRHLDQLLMSAMYAICKVKFVDLRFKTIVTAYKE
LPNTNQETFKHVLISEGKYDSIIVFYNLVFMQRLKTNILQYASSRLPTLSPIPHIPRSPY
KIPNSPLRVPGSSNVYVSPMKSCASPMTPRSRILISLGESFGNSERFQRINEMVKSSEWT
LKRRADGAGGPKPLKRLRFDTEGQDEPDGSKPSGGSALIQKLTEMNSTRSRMQEQKMKEE
AESVREEVPNGVEKHE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaaaagcggacgccacagaacaaggaaataaaacaaaacatcaccagctca
gacaaccacaatgtcaagtctccgagcaagaattcagatgactctgttgtgtccacgccc
aagcatagagacaaagaagcagatttcgtcagcctctgcaaagatctccaggtgacaaat
tcactctgtaatcacgcatggtccatatggaggaaagtgtcggaatccacggagaaaatg
ccggacacaaaccggaagatgtgggcagcctgcctgttcgttgctggaatagacatggat
gccccaagccctggcttcacacaagtgcagaaagctgctggcctcaacgtgaagcagttc
cttgaagtgatgaggaacttggacgtgaacatcgacatcatcagtgccaaagtgaactct
gccgtgagcaagctggagaagaagtacgacgtctccctggccctctaccagcgctttgag
aagatctggaaggacatctacatggagccctcggagtcagagagcaacgagatcttcagg
agcgtctggagcatgttcattttggctaaaggaaggttcctgcagatggaggatgacctg
gtgatctccttcctgctgctcatctgtgtgctggagttcttcctcaagcgctcgcccccc
tccctcatcaagcccctctacagtgcaaagatgacccccacaaggagctcccgccgtaac
catggtaaagccaaaccgcgacctccagaggccaacgagccgctgctggaggtcatctgt
cgggagaacgagtgcaacctggacgaggtgaagaatgtttatgagaccgtcttttctccc
ttcttggaatcttcaggcttttcaaagtctcaggacttaccaaagtttgaagagctgtcg
gcaaagttcgaagaagtttttctaaaaacgaaagactttgacggcaggctgttcctgaat
ggtgaagagaaatgcagccaggagaaaacagacacaggccatgtggagagtacgcctaag
aagctggtgtctgctgaggagttcaacccagcgatcctgcaaacccccgtcagggcaacc
ttatactctgtccagcaactccgggtctccctcacctccgccagtgaccagccctcggac
acgctcatgacctacttcaagaactgcacggtggaccctacggaggcggtggtggagcgt
gcgcagcgtctcggggcgctgttcggccaggccttcgctcaggtggtcagtccaggatgc
tcgggcctcggcaaccagaggttcgctcttggcgtgcggctctactacagagtgatggag
tccatgctgaaatcggaggagaagaggctgtccgtgcacaacttcagtaaacttctcaac
gactccacattccatacatcccttctggcgtgctccctggaggttgtcatggcaacatac
ggcagcggtctgtccacggacacggacctgagcttcccgtggctgctgggggtgttccag
ctgcacggcttcgacttctacaaggtgatcgagagcttcatcaaggccgaggccagcctg
caccgcgacatggtgaagcacctggagcgctgtgagcacctgatcatcgagagcatcgcc
tggagaaccgactcgccgctgtttgagctgctgcagcgggccggagaggagggtcgcctg
gagaccgccgagccccccgccaccttccaccagcccccccagcacagccacaccgccgca
gacctctacctgtctccagtgcgtcccagcaggtccgtgcccccagtgcaggacccgagc
ccccccagggtgaccccgcccccatcggcccccgcccggagcccccccaccacggccccg
cccccagcggcccccacccagccctccagaccccccaggtccaactcgctcggccacttc
tacaagaaactgtacagggtggcatacctgcggttgaagatgctgtgcacgcgtctgctg
tcggaccacgcggagctggagcccatcatctggacgctgctacagcacacactcaaggac
gagcacgagctgctgcgggaccgacaccttgaccagctgctgatgtctgccatgtacgcc
atatgcaaagtgaagtttgtggacctgcgcttcaagaccatcgttacagcgtataaggag
ctcccaaacacgaatcaggagacgtttaagcacgtgctgatcagcgagggcaagtacgac
tccatcatcgtcttctacaatttggtcttcatgcagaggctcaagaccaacatcctccag
tacgcctcctccagacttcccaccctgtccccgatcccacacatcccccgcagcccctac
aagatccccaactcgcccctgagggtccctggcagcagcaacgtctacgtgtcccccatg
aagagctgcgcgtcccccatgaccccccgctcaaggatcctcatatcactcggagagtca
tttgggaactctgagcggttccagaggattaacgagatggtgaagagcagcgagtggacg
ctgaagaggcgggcagatggcgccggcgggcccaaaccgctgaagaggctgcgcttcgac
accgaggggcaggacgagccggacggcagcaaacccagtggaggatcagcattgattcag
aagctcacagaaatgaactcgactcggagccggatgcaggagcagaagatgaaggaggag
gcggagtctgtgagagaggaagtgcccaacggagtggagaagcacgaatga
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