Sardina pilchardus (sardine): 134080137
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Entry
134080137 CDS
T10667
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04530
Tight junction
spil04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134080137 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134080137 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spil04990
]
134080137 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
spil04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
134080137 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_6
SOS1_NGEF_PH
PDZ_2
PH_10
Motif
Other DBs
NCBI-GeneID:
134080137
NCBI-ProteinID:
XP_062392386
LinkDB
All DBs
Position
5:complement(10602674..10667010)
Genome browser
AA seq
1651 aa
AA seq
DB search
MGNVESQNGDHAYYGTQQGHLSRKHMSRSLRLPNKQSRRSRPTSSSAKAEHRNSQASTRS
SSTPSIPQSLAENGLEPFNEKDALGELADPMWTPGGHNNNHHHVVALNLRPVSFHDHLGD
AVATPASEDSVEADTVVQEDEDEEDEEDSHGGLYTREATYLQRMNDAPREGGSFKKKRSK
SADMWREDSLEFSLSDLSQEHLTSTEEIIDGMEDFAALDAKQGRDAGERANSLDELCTQK
TPVLRGKRNRYKHGRNGERVPGMETPDQMLSPTEDDGNGYGAYTLPCRRSHCLSEGLPSQ
QATICSRMQGRRAQTTHNIAAQDGSEYGDSGIDGVAADVDLQSRRCKTMSASFSVYSAAS
SSMFAGSDSGSSSGGGGGGGGGSGGSGRSHGADTLLGVYENFRQELDMGCSRQTRDALEE
AGSAGSDERSSGTLSSIYQSDAALLNAAQGTVRKAGTLSVKNFLVHKKNKKVELAARRKW
KRYWVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNALG
DGFLFQTSGQTELENWITAIHSACAGAVARQHHREDTVRLLRGEIKKLEQKIDMDEKMKK
MGEMQLSAVTDNKKRKTILEQIFLWEQNLERFHVDLFRFRCYLASLQGGELPNPKRLLAF
ASRPTKLAMGRLGIFSVSSFHALVAARTEGGVRRRSQALSRSSSKRKSRFSSLWGLDTTS
KKKTKGRPTINQVFVDGATPVRRNLGRTFEDTVKESLKEQEGVEKSPLPPADSEVWVPGY
LTPSWVCLPNEKPVLAVIEPGQTALYTLESVCKAQKLDTSMHYIRLKFLIDGQPQFYVPK
PEEDVCELLFKEMEICPKVSKVIQFDRAESCVVGYGFSVVVVDEDGTQQLHVTDVKVGGL
AAAKGLRAGDEILQLNGKAASALELSDMQAAFALPSLALRVSTLPAVEPGHLCHRPPRRT
EHDDTLCTDIFSQNQEEILDEGAGLAPESLDDGLGDGSILTSDSPGDSLEDELDADTSPK
STEQVATFCRSLHDMNPAERPASSSSSSSSSCTPSPVSPNPSQTALRQLPDAVKLRHVIC
ELVETERTYVKDLKWLIEKYLTPLQKESFLTQDELDVLFGNVVEMLEFQVEFLKTLEDGT
RLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVIAKAKTDPDFK
AFLDERNPRQQHSFTLESYLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLDVAMKAMNK
VASHINEMQKIHEEYGAVFDQLINEQSGERKEVADLSMGDLLLHATVAWINPPPSLIKGK
KEPELAVFVFRTALVFVYKDSSKHKKKIGASHRVSTADEKDPIRFRHMIPTDDLQLRNLG
NADGTAMCEIVHVRSESEGRPERTFHLCCSSPDSKKDFLKTVHSILRDKQRRQLLKTESL
PPNQQYIPFGGKRLCALKGARPTMDRAVSAPNRTLGRRKMVRNRFTIDRDVIFDDDDSNQ
STDHDVDSATPVPPEPASQQEPAPLSHSAPPPPKDTERWVEQQFDLGRYGNQVKETDILS
DDDDYCESVRGPSAEPSAECPLGALSLGQEGGENGDAHPPTPAAVVPERTQGPLKLTPLR
KQCAVEGVSEHDREVIWVRRDDFGSPNGDVF
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtggagagccagaatggagaccatgcctactacgggactcagcagggccac
ctctcccgaaagcacatgtcccgctccctccgcctccccaacaagcagtcgcggcgctcg
cggcccacctcgtcctcggccaaggccgagcaccgcaactcgcaggcaagcacgcgctcc
agcagcacgcccagcatcccgcagtccttggccgagaacggcctggagccctttaacgag
aaggacgcgctgggcgaactcgccgaccccatgtggacgccggggggccacaacaacaac
caccaccacgtcgtcgccctgaacctgaggcccgtctcgttccacgaccacctgggggac
gccgtggcaacgcccgcctccgaggacagcgtggaagcggacacggtggtgcaggaggac
gaggacgaggaggacgaggaagacagtcacggggggctctacacccgggaggccacctac
ctgcagcgcatgaacgatgcgccccgggagggcggaagcttcaagaagaagaggagcaag
tcggccgacatgtggcgcgaggacagcctggagttctccctgtccgacctgagccaggag
cacctgaccagcaccgaggagatcatcgacgggatggaggacttcgctgcactggacgcc
aagcaagggcgagacgccggagagagggccaactctctggacgagctgtgcacgcagaag
actcccgtgctgaggggcaagcgcaaccgctacaagcacgggcggaacggcgaacgggtg
ccgggaatggagacgcccgaccagatgctgtcccccacagaggacgacgggaatgggtac
ggagcgtacacgctgccctgccgacgctcgcactgcctatcagaagggctgcccagccaa
caggcaaccatctgctccagaatgcaggggagaagggcacagaccacacacaacatcgct
gcgcaggacgggagcgagtatggcgacagcggcatcgacggcgtggcggccgacgtggac
ctgcagtcgcgccgctgcaagaccatgtcggcctccttctccgtctactcagcggccagc
agctccatgttcgccggcagcgacagcgggagcagcagcggcggtggtggcggcggcgga
gggggcagcggcggtagcgggcgatcgcacggcgccgacaccctcctgggcgtctacgag
aacttccgccaggagctggacatgggctgctcgcggcagacgcgggacgccctggaggag
gccggctcggcggggagcgacgagcggagcagcggcacgctcagctccatctaccagtcg
gacgccgcgctcctcaacgccgcccagggcacggtccggaaggccggaacgctctccgtc
aagaacttcctggtgcacaagaagaacaagaaggtggagctggcggcacgacgcaagtgg
aagcgctactgggtctctctgaaaggttgcacactcttcttctacgagacagacgggcgg
tcggggatcgaccataacagcattcccaagcacgccgtatgggtggagaacagcattgtg
caggctgttccggaacatccaaagaaggactttgtgttctgtctcagcaatgctctggga
gacggcttcctctttcagacatcgggtcagacggagctggagaactggatcacggcgatc
cactcggcgtgcgcgggcgcggtcgctcggcagcaccatcgcgaggacacggtgcggctg
ctgcgcggcgagatcaagaagctggagcagaagatcgacatggacgagaagatgaagaag
atgggcgagatgcagctctccgccgtcaccgacaacaagaagaggaagaccatcctggag
cagatcttcctgtgggagcagaacttggagcggttccacgtggatctgttccggttccgc
tgctacctcgccagcctgcaggggggcgagctgcccaatcccaagcgcctgctggcgttc
gcctcgcgccccaccaaactggccatgggacgcctgggcatcttctccgtctcgtccttc
cacgccctggtggcagcgcgcacagagggcggagtgcgtcggcggagccaggccctgtcg
cggtcgtccagcaagcggaagagccggttctcctccctctggggcctggacactacctca
aagaagaagaccaaaggccggcccaccatcaaccaagtgtttgtggacggcgcgactccg
gtgaggaggaacctgggacgcacgtttgaggacacagtcaaggagagcctgaaggagcaa
gagggcgtggagaagagcccgctgccccccgccgacagtgaggtgtgggtgcccggctac
ctcaccccctcctgggtgtgcctgcccaacgagaagcctgtgctggcggtcatcgagccg
ggacagacggcgctctacaccctggagtctgtgtgtaaggctcagaagttggacacctcc
atgcactacatccggctgaagtttctgatcgacggccagccgcagttttacgtccccaag
cccgaggaagatgtgtgtgagctgctcttcaaagagatggaaatttgccccaaagtgtca
aaggtcatccagtttgaccgggccgagtcctgtgtcgtcggatacgggttctcggtggtt
gtggtggatgaggatggcactcagcagctccacgtgacagatgtgaaagtaggaggcctg
gccgccgccaaaggactgcgagctggcgatgagatcctgcagctgaacgggaaggcggcg
tcggccctggagctgtcggacatgcaggctgcgttcgctctgccctcgctggccctgaga
gtcagcacgctccccgccgtcgagccgggccacctgtgccatcggcccccccgccgcacc
gagcacgacgacaccctctgcactgacatcttctcccagaaccaggaggagatcctggac
gagggggctggactggccccagagagcctggatgacggcctgggcgacggatccatcctg
accagcgacagcccaggggacagtctggaggatgagctggacgctgacacatcacctaag
agcacggagcaggtcgccactttctgccggagcctccacgacatgaatcctgcggagcgc
ccggcctcgtcttcgtcctcctcctcttcctcgtgcacgccgagccccgtctcgcccaat
ccctcgcagaccgccctgcgccaactccccgacgccgtcaagctccgccacgtcatctgt
gaactggtggagacggagcgcacttatgtcaaggatttgaagtggctgattgagaaatac
ctgacacctcttcagaaggagagcttcctaactcaagatgagttggatgtcctctttgga
aatgtggtggagatgttggagttccaagtggaatttctcaagacgcttgaggacggaacc
agacttgtgccagatttagagaagcttgagaaagtcgatcaattcaagaaagtccttttt
tccttgggtggctcttttctctactacgcagaccgctttaagatctacagcgctttctgt
gctagccacaccaaagtccccaaggtcatcgccaaagccaagacagaccccgatttcaag
gccttcctggacgagcgcaaccccaggcagcagcactccttcacgctggagtcgtacctg
atcaagcccatccagagggtgctcaagtaccccctgctgctccgcgagctccactccctg
acagaccctgacagcgaagagcactaccacctggacgttgccatgaaagccatgaacaag
gtcgccagccacataaacgaaatgcagaaaatccacgaagagtacggtgctgtgtttgac
cagctgatcaacgagcagagtggcgaaaggaaagaggttgctgatttgtcaatgggtgac
ctgttactgcacgccactgttgcttggatcaatccgccaccttctctcatcaaggggaag
aaggagccggagttggctgtattcgtgttcagaacggcgctggtttttgtgtacaaggat
agctccaagcacaagaaaaaaatcggagcatctcacagggtgtccacggctgacgagaag
gaccccattcgcttcaggcacatgatccccacagacgacctccagctcaggaacctcggc
aatgccgatgggacagccatgtgtgagattgtgcatgtccggtccgagtcggagggcagg
ccagagaggacgtttcacctgtgctgcagctcccccgacagcaagaaggacttcctgaag
acggtgcactccatcctgcgggacaagcagcggcggcagctcctcaagacggagagcctg
ccccccaaccagcagtacatcccgttcggaggcaaacgcctgtgcgcactcaagggagct
cgccctaccatggacagagcagtttcagcaccaaatcgaactctgggacggaggaagatg
gtgcggaaccgcttcaccattgaccgggatgtcatttttgacgacgacgactcgaaccaa
agcactgaccacgacgtggactcggccacgccggtaccacctgagcctgcgtcgcaacag
gagcccgcgccgctatcccacagcgcacctccgcccccaaaggacacggagcgctgggtc
gagcagcagttcgacctcggccgctacggcaaccaggtcaaggagacggacatcctcagc
gacgacgacgactactgcgagtcggtgaggggccccagcgcagagccgtcggccgagtgt
ccactaggggcgctgtccctggggcaggagggcggcgagaacggggacgcgcacccaccg
acccccgccgccgtcgtccccgagaggacccagggacccctgaagctgaccccgctcagg
aagcagtgcgccgtcgagggcgtctcggaacacgaccgcgaggtcatctgggtgcggcgg
gacgacttcggcagccccaacggagacgttttctga
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integrated database retrieval system
