Sardina pilchardus (sardine): 134080175
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Entry
134080175 CDS
T10667
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil00780
Biotin metabolism
spil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
134080175 (hlcs)
Enzymes [BR:
spil01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
134080175 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
134080175 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
134080175 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
134080175 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
134080175
NCBI-ProteinID:
XP_062392445
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All DBs
Position
5:11560710..11585296
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AA seq
917 aa
AA seq
DB search
MLITLCYVYLWVRFQKFYTPVIRRTVQRLCGSSNLSSFTFCAVKPECQTEDQTSKQREST
LPEDDTGVFLKLGNKAIYITEPQACDDLSKWTLLIGSSLFCRPRIENIAFIIEATSGPNG
GQSLNSNKKVLKWSDYCHPLACSPGLPFRAVAETSVDNFSRLGVAFMEDRLQMENGLVPE
KIVSVLLQESTLRELIEKKQSLNSNQTEQKVQHLPLNPTTAIVLSGPSPREKEAEDISQG
LELARRKSSVNLSVASELTGQKSSEGECRDSRDKEQAAGPVAGHHHMEGHHHLHLSSCHE
CLELEHSTILSVKYASIENIPDLPHDYDYDDSDEGTEELESFAGQSKRVNVSGKPPNVLV
YTGSCVERFDLIRCLLSECIDTDSYILYPLRPQQALSEPWLENTLLLVLAADEALTPQLQ
ERFLAYLDKGGKILGLSSTFSPAGLTLVVKEAQRNQICRLGFTKADSTELELSVLASGSV
YVREPADCVTGEVELWGELHGDAKDMVIVRVTHGACGGDAVLCQVRLETAPDSQHVQSPG
DFDMLKKSNALRYEVITEILTSLGLSCELSQVPPPSPVHVLSTCPELKGRFLKWLESQMD
KEGMLRSPKTCLKLLSSAELQTDLPEGVLAVLPEPPEFLSEQFNLQAYNHHLHTHTLGRT
LLYAEVTPTTMDLLEGLMLELPEEMGLIAIALRQTKGRGRGGNAWLSPLGCAMFTLHVRI
PISSSLGQRIPFLQHLAALAVVEAVCTLPGYEKIDLRVKWPNDIYYGSLMKLGGVLVNST
VMGSTFHILIGCGFNVSNSNPTICINDLVVQHNREHGSDLEPLSPAHLIGRTVTQLEKLI
ADFQEKGPSAVLPIYYKRWVHSGTRVKLWSEDGPEAEVVGLDDHGFLQVKSDKEVVSVQP
DGNSFDMLRNLVVTKHS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcttataacgttgtgctacgtctacctctgggtgcgttttcagaagttttacacgccg
gtcattcgcaggactgtacaaagactgtgcgggagcagtaacctcagcagtttcacgttt
tgtgctgttaagccagagtgtcaaacggaggaccaaacgtccaagcagcgcgagtcaacc
ttaccagaagacgacacaggggttttccttaagctgggaaacaaggctatatatattacc
gaaccacaggcttgtgatgacctcagcaagtggactctcttgataggatcttccctgttc
tgtcgcccaaggatagagaacattgctttcatcatagaggccacatcgggacctaatggg
ggccagtctcttaactcaaataaaaaagtgctaaagtggtctgattactgccacccgttg
gcctgcagtcctgggctgcccttcagggctgtagctgagacgagtgtggataactttagc
cgtttgggggtggcgttcatggaagatcggcttcagatggaaaatggtcttgttccagaa
aaaatagtctctgttctacttcaagaatccaccctcagggaacttattgagaagaaacaa
tcattgaacagcaaccagactgaacagaaagtccagcatcttcctttaaatcctaccact
gcaatagtactttcaggaccttcaccaagagagaaggaagcggaagacatctcacagggc
ttagagctggcacgcagaaagagcagcgtgaatctctctgttgcttcggagctgaccggt
cagaagagcagtgaaggggagtgtagggattctcgtgataaggagcaggccgcaggccct
gtggcaggacaccatcacatggaaggccaccaccacctccacctgtccagctgccatgag
tgcctggagctggaacacagcaccatcctgtccgtgaagtacgcttcgatagagaacatt
ccagacctcccgcacgactatgactatgatgacagcgacgaaggtacagaggaactggag
agctttgctggccagagcaaaagggtcaacgtcagcggaaagcccccgaatgttctcgtc
tacactgggagctgcgtggaaagatttgacctgatccgctgccttctttctgaatgcata
gacactgacagctatattctctatccgctgaggcctcagcaggccctcagcgagccgtgg
ctggagaacacgttgctgttggtgctagcagcagacgaagccctcaccccacagcttcag
gagcgttttctggcgtacctggacaagggagggaaaatcttgggtctctcctccaccttc
tctccagcgggcctgactctggtggttaaggaagcccaaaggaatcagatctgcaggttg
ggtttcaccaaagccgacagcacggagttggagctgagcgtgttggccagcgggagcgtg
tatgtgcgggagccagcggactgcgtgactggcgaggtggagctctggggggagctgcac
ggagacgccaaggacatggtgatcgtcagagtgacacacggagcatgtggcggggacgct
gtgttgtgtcaggtgcgtctggagaccgccccagattcccagcacgtgcagagcccaggt
gactttgacatgctcaagaagagtaatgcccttcgctacgaggtcataacagagatcctc
acctcactgggactgagctgtgagctgagccaggtgccaccgcccagccctgtgcatgtc
ctctccacctgcccggagttgaaaggccgcttcttaaagtggctagaaagccagatggac
aaggagggcatgctgaggtccccaaagacctgtctgaagctgttgtcaagtgcagagctc
cagacggacttgcctgagggggtgcttgccgtgctccctgaacccccagagttcttgtcg
gagcagttcaacctgcaggcctacaaccaccacctgcacacccacaccctgggtcgtacc
ctgctctatgccgaggtcacccctactaccatggacctgttggaggggttgatgcttgag
ttaccagaggaaatggggttaatcgccatagctcttcgtcagacaaagggcagaggtcgc
ggaggaaatgcctggcttagcccgttgggttgcgccatgttcaccctgcatgtgcggatt
cccatcagttcgtctctgggtcaaaggattcccttcctgcagcacctggccgcgctggca
gtagtggaggccgtgtgcactctaccgggatatgagaaaatagacttgcgggtcaaatgg
cctaatgacatctactatggtagcctaatgaaacttggtggtgttctggtgaattcaaca
gtcatgggatccacgttccacattctcataggctgtggcttcaatgtcagtaacagcaac
ccaacaatctgcatcaatgacctggtggtgcaacataaccgggagcatggctcagacctg
gagcccctgagtccagcacacctcattggccgcacagtcacccagctcgaaaagctcatt
gcagattttcaagagaagggcccatcagccgtgctgcccatatactacaaaagatgggtt
catagcgggacgcgggtgaagttgtggagtgaggacggcccggaggcggaggtggtgggg
ttggacgaccacggctttctacaggtgaagtcagacaaggaggtggtgtctgttcagcct
gacgggaactccttcgacatgttaaggaacctggttgtcacgaagcacagctag
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