Sardina pilchardus (sardine): 134082414
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Entry
134082414 CDS
T10667
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil00310
Lysine degradation
spil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134082414 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134082414 (setdb1b)
Enzymes [BR:
spil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
134082414 (setdb1b)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134082414 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
134082414 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
DUF7605
Motif
Other DBs
NCBI-GeneID:
134082414
NCBI-ProteinID:
XP_062394097
LinkDB
All DBs
Position
6:3023063..3045841
Genome browser
AA seq
1339 aa
AA seq
DB search
MPRKGRRSEVQKKRFQKKKLSGCGISDGLPQSSDLAQSQRETGTVLLSVYRPLSTTYNQL
SKLNRLRWMRRESRKRGLGTKEFSRLMAMEMEVDLGSLEQELEEELGVSLDELKQWIEEQ
VEQSEVVQQRKAQLAELSDWVEQREREVATVDSLCHNASESVGECEELVKQVYTKMGLTY
RESSSEDEGGGVVEASEVIEIDDDDDDDVIAVGCVVPPKKITTPGKDSVLKEASAAIQRS
SQQIQKLAQTVSSPPAPPSAVGSSPQKSPMVTPLRSGGLNVPAVFVSQAPRNAPTQPNAN
LKEDAMKVDMTILGKKRTKTWHKGTLIAIKAIGSTFKYKVKFENKGKSLLSGNHVAFEYN
PTLERLYVGARVVAKYKDGNQVWLYAGIVAEMPNSKNRMRFLIFFDDGYASYVSLPELFP
VCRPLKHTWEDIEDASCRDFIKEYITSYPNRPMVLLKPAQLIKTEWEGTWWRSRVEEVDG
SLVKILFLDDKRSEWIYRGSTRLEPMFNLKMNTANNQEKKVAGQLRTRPNMGALRTKGPV
VQYTSDLRAVAQTVVQRPLTTQPAPPKPPPGPGPGPPAQMLRPESPDSRFKFQVAKKSTT
PYVPQRPGLLPTHQAPVKTVVPIPSQGSPSRYFLVQAGAVQALSGTVVPQPPPAFQMPSL
PPPLPPSLPNERIPHEPSYQAPNDRLFYMAHTCSHDCLRRIRPARADKYRGRNPLLTPLL
YEFRRMTGRKRLNRKMSFHVIYKAPCGLCLRNMAEIERYLFQTRCDFVYLEMFCLDPYVL
VDRRFQPQRPYYFIRDITKGNEDIPLSCVNEIDTTPPPDVVYSKERLPADGVFINTDEDF
LVGCDCTDGCKDKSKCSCHQLTMQATGCTPGGQLNTTAGYLHKRLDECLPTGIYECNKRC
RCNHQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKE
GLEMGDEYFANLDHIESVEAFKEGYESEAHCSDSDGSGVDMSRVKLNANATPALQVKAAI
KNEDSSSNGGKGKDDSSGDGEEEENEDSNDDDDDSSDDTFVKDTYYSSSSVWRSYTTRRQ
AKGIKEGSQDSKDGMSVSTEGKEERKPPPMPEESGKSKVASWLSSSPGTSGAVKTEGIKT
EKKEPVDSKITVKTEGGKKATDVMSLSDSDDVQTISSGSDDNKEREKKTQAVVKRQVAVK
STRGIALKTAHGMLSGGGGGGGGGGGGGGGGGGGGGGGDSGLRSTRQFFDGEESCYIIDA
KLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSV
EGKELLCCCGSTECRGRLL
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaaaagggagaaggtctgaggttcagaagaaacgctttcaaaagaagaagctc
tctggctgtggaatttcagatggtctaccacagtcttctgacctggctcagtcccaaagg
gaaacagggaccgtattgctcagtgtttatcggcctttatcgacaacctataatcaactc
agcaaacttaacagactaaggtggatgcgaagagaatctcgcaaaaggggactagggaca
aaggagttttcacgcctgatggcgatggagatggaggtggacctggggagtctggagcag
gagctggaggaggagctgggggtgtcgctggacgagctgaagcagtggatcgaggagcag
gtggagcagagcgaggtggtgcagcagcgcaaggcccagctggctgagctctctgactgg
gtggagcagagggagagagaggtggccaccgtggatagcctctgccacaacgcctcagaa
tctgttggggagtgtgaggagctggtcaagcaggtgtacactaagatgggtctgacgtat
cgggagagcagttcggaggatgaaggaggcggtgttgtggaggcctcggaggtcatcgag
atcgatgatgacgacgacgatgacgtgatagccgtggggtgtgtggtcccacccaagaaa
atcaccaccccagggaaagactctgtgctgaaggaagcgtctgcagcgatccagcgtagc
tcccagcagatccagaagctggcccagacggtcagcagcccgccggcccccccctctgcc
gttggctccagcccccagaagtcgcccatggtgacgccgctgcgctcgggggggctcaac
gtgccggccgtgtttgtgtcgcaggcgccacgcaacgcccccacccagcccaacgccaac
ctcaaggaggacgccatgaaggtggacatgaccatcctgggcaagaagcgcaccaagacc
tggcacaagggcacgctcatcgccatcaaggccataggtagcacttttaaatacaaggtg
aagtttgagaacaagggcaagagtttgctgtctggcaaccacgtggcgtttgagtacaac
cccaccctggagcggctgtatgtgggtgcccgcgtcgtggccaagtacaaggatggcaac
caggtgtggctctacgctggcatcgtcgcggagatgcccaacagcaagaaccgcatgagg
ttcctgatctttttcgatgatggctatgcctcctacgtcagtctgccagagctcttccca
gtctgcagaccactgaagcacacgtgggaggacattgaggacgcgtcgtgccgggacttc
attaaggagtacatcacgtcgtaccccaaccggcccatggtgctgctgaagccggcgcag
ctcatcaagacggagtgggagggcacctggtggcgcagccgcgtggaggaggtggacggc
agcctcgtcaagatcctcttcctggacgataagcgcagtgaatggatctaccgtgggtct
acgcggctggagcccatgttcaacttgaagatgaacacggccaacaaccaggagaagaag
gtggcaggacagctgaggacccggcccaacatgggagcgctgaggactaaggggccagtg
gtgcagtacaccagtgatctcagggcagtggcccagacggtcgtgcagaggcccctcacc
acccagcctgcacccccaaaaccccccccaggccccggccccggccccccagcacagatg
ctccgcccagagagcccagacagtcgcttcaagttccaggtggcgaagaagagcaccacg
ccgtacgtcccccagcggccgggtctgctgcccacccaccaggcgcccgtcaagaccgtg
gtgcccatccccagccagggcagcccgtccaggtatttcctggtgcaggcgggtgcggtg
caggccctgtccggcacggttgtcccgcagcccccgccagcgttccagatgccgtccctc
cccccgcccctgcccccctccctccccaacgagcgcatcccccacgagccgtcctaccag
gcgcccaacgaccgcctcttctacatggcgcacacctgctcgcacgactgcctccgccgc
atccggcccgcacgcgccgacaagtaccgcggacgcaacccgctgctcacgcccctgctc
tacgagttccgccgcatgaccggacgcaaacgcctcaaccgcaagatgtccttccacgtg
atctacaaggcgccgtgcggcctgtgcctgcgcaacatggcggagatcgagcgctacctg
ttccagacgcgctgcgacttcgtgtacctggagatgttctgcctggacccctacgtgctg
gtggaccggcgcttccagccgcagcggccctactacttcatccgcgacatcaccaagggc
aacgaggacatcccgctgtcctgcgtcaacgagatcgacacgacgccgccgcccgacgtg
gtctacagcaaggagcgcctccccgccgacggagtcttcatcaacaccgacgaggacttc
ctggtgggctgcgactgcaccgacggctgcaaggacaagtctaagtgttcgtgtcaccag
ctgaccatgcaggccacgggctgcactcctggcggccagctcaacaccaccgccggctac
ttgcacaagcggctggacgagtgcctgcccacagggatctacgagtgcaataagcgctgc
cgctgtaaccaccagatgtgcactaaccggctggtgcagcacggcctgcaggtgcggctg
cagctgtttaagacccagaacaagggctggggcatccgctgcctggacgacgtggccaag
ggctccttcgtctgtatctacgcaggcaagatcctgacggacgactttgcggataaggag
ggtctggagatgggcgatgagtactttgccaacctggaccacatcgagagcgtggaggcc
tttaaggagggctacgagagcgaggcccactgctccgacagcgacggcagcggagtggac
atgagcagggtcaagctcaacgccaacgccacgcccgccctgcaggtcaaagccgccatc
aagaacgaggacagcagcagcaacggcggcaaaggcaaagatgattcctcaggagatgga
gaagaggaggagaacgaggactctaacgacgatgacgacgacagctcggacgacacgttt
gtgaaggacacgtactactcgtccagctccgtgtggaggagctacaccacgcgcaggcag
gccaagggcatcaaggaagggagccaggacagtaaggatggcatgagtgtgtcgacggag
ggcaaggaggagcgcaagccgccgcccatgccagaggagagcggcaagagcaaggtggcg
tcgtggctcagctcctcccctggcaccagcggcgccgtcaagaccgagggcatcaagacc
gagaagaaggagccagtggactctaagataactgtgaaaacggagggaggcaagaaggca
acggatgtgatgagtctctctgatagtgacgatgtgcagaccatcagctccggttcagat
gacaataaggagcgagagaagaagactcaggcggtggtgaagaggcaggtggcggtgaag
tccacacggggcattgctctgaagacggctcatggcatgctgtcaggcggtggaggaggg
ggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggggggggtgactct
ggcctcaggtctacacgacagttcttcgacggtgaggagtcctgttatatcattgatgcc
aaactggagggaaaccttggacgctatctcaaccacagctgcagtcccaatctctttgtg
cagaacgtgttcgttgatacccatgacctgcgtttcccatgggtagccttcttcgccagc
aagcgtatccgggcgggcacagagttgacgtgggattataactatgaggttggcagcgtg
gagggcaaggagctgctgtgctgctgtggatccacagagtgcaggggtcgcctgctctaa
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integrated database retrieval system