Sardina pilchardus (sardine): 134088627
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Entry
134088627 CDS
T10667
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
KO
K06752
MHC class II antigen
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04145
Phagosome
spil04514
Cell adhesion molecules
spil04672
Intestinal immune network for IgA production
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134088627
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134088627
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
134088627
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134088627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134088627
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134088627
Exosomal proteins of epithelial cells
134088627
Exosomal proteins of breast milk
134088627
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
C2-set_3
Psg1
Ig_3
Motif
Other DBs
NCBI-GeneID:
134088627
NCBI-ProteinID:
XP_062398665
LinkDB
All DBs
Position
8:complement(10458988..10468846)
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AA seq
306 aa
AA seq
DB search
MSTAHLFISGVIILSTLSGAHGDDGYYTSVVDQCRFSSSNLTDLEFIRSYWFNKIQIIVF
NSTVGKFVGYTSFGVHNAERWNKDKEYLGEMRAEKDRSCKPNAEMKINNILTKAVEPEMM
LRLTRASSGGQPAVLMCSAYSFYPMAIRMTWYRDEQEVTSEVVSSVELADGDWYYQMHSS
LVFTPKAGEKISCVVEHSSLKEPKELVWEPSSEPSMSQAERYMVAMGVAEMLMGLSLAAA
GFIYYKTKSTGRISATKTSMDKGFHQMNMDSNFLLWLLSSYRSFSVHCDSKTPVKKSILN
TVCSDH
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagcacacctcttcatctctggggtgatcatcctctccaccctgtcaggagca
catggagatgatggatactacacctccgtagtggaccagtgccgattcagctcttcaaac
ctgacagatctggagttcattaggtcttactggtttaacaagatccagatcatagtgttc
aacagcacggtggggaagtttgtgggttacacttcgtttggggtgcataatgcagagaga
tggaacaaggacaaagagtatctgggagagatgcgtgctgagaaagacagatcctgcaag
cccaatgctgaaatgaagattaataacatactgaccaaggcagttgagccagagatgatg
ctgaggctgacgagagcatccagtggtggtcaacctgctgtgctgatgtgcagtgcctac
agcttctacccaatggccatcagaatgacctggtacagagatgagcaggaggtgaccagt
gaggtggtatccagtgtggagctggcggatggagactggtactaccagatgcactccagc
ctggtgttcacccccaaagctggagagaagatctcctgtgtggtggagcactccagcctg
aaggagcccaaggagttggtctgggagccctcctcagagccctccatgtcccaagctgag
aggtatatggttgccatgggagtagcagaaatgctgatggggctgagtctggctgctgcc
ggcttcatctactacaagacaaagtccacagggcggatctcggcaaccaagaccagcatg
gacaaaggttttcatcagatgaatatggatagcaacttcctgctttggctattgagttct
tacagatctttctcagtacactgtgattcaaagaccccggtgaagaaatccatcctgaat
accgtgtgcagtgaccattaa
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