KEGG   Sardina pilchardus (sardine): 134088630
Entry
134088630         CDS       T10667                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04145  Phagosome
spil04514  Cell adhesion molecules
spil04672  Intestinal immune network for IgA production
spil05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:spil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    134088630
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    134088630
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    134088630
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    134088630
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134088630
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134088630
  Exosomal proteins of epithelial cells
   134088630
  Exosomal proteins of breast milk
   134088630
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 C2-set_2 ig C2-set_3
Other DBs
NCBI-GeneID: 134088630
NCBI-ProteinID: XP_062398670
LinkDB
Position
8:complement(10471250..10473953)
AA seq 238 aa
MTLTVILLVLTGIIYTDTKIVHVDIHASGCTDTDGEDMYGLDGEELAHADWKAQKYVMTL
PEFADPFVYAEGTYEQAVANQQICKQNLAVAIQAYKHPAVAEAPPMSSIYPRGEVKIGQE
NALICSIGGFYPPRLNVTWTRNTGVVTEGVSSSQLRVNVKDGAYSLFSTLQFTPQKGDIY
TCTVDHQALERPMTRVFDVEGSEVSKLGLSLPAVICVVGLIVEMLGMATGLFFFIKAR
NT seq 717 nt   +upstreamnt  +downstreamnt
atgactttaacagtgattttactagtcctcactgggatcatctacacagacacaaagatt
gttcacgtggacattcatgcgtctggatgcacagacacagatggagaggacatgtatgga
ctggatggggaagagctcgcacacgcagactggaaggctcagaagtatgtgatgacactg
cctgagtttgctgatccatttgtgtatgcggagggaacatatgagcaggcagttgctaac
cagcaaatctgcaagcagaacttggcagtagccatacaagcttataaacacccagcagtg
gcagaggctcctcccatgagctccatctaccccagaggtgaggtgaagatcgggcaggag
aacgctctcatctgctccatcggtgggttctacccgccccggctcaacgtgacgtggacc
aggaacaccggggtggtgactgagggagtgagctccagccagctgcgggtgaatgtgaag
gacggcgcctacagcctgttctccaccctgcagttcacccctcagaagggagacatctac
acctgcactgtggaccaccaggcactggagcggcccatgacaagagtgttcgatgtcgag
gggtctgaggtgtctaagctcggtctcagtctgccagcagtgatctgtgtggtgggtctg
atcgtggagatgctgggtatggctaccggactcttcttcttcatcaaggcaagatag

DBGET integrated database retrieval system