Sardina pilchardus (sardine): 134092010
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Entry
134092010 CDS
T10667
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134092010 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134092010 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
134092010 (si:ch1073-335m2.2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_PARP14_3
RRM_YTH1
RRM_7
Motif
Other DBs
NCBI-GeneID:
134092010
NCBI-ProteinID:
XP_062400782
LinkDB
All DBs
Position
9:32494798..32514999
Genome browser
AA seq
3239 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDNPPSSSHAREVSGFSRAAVGPVYGPPV
SLHGREGRYERRIDGSSDSRERTYDHSPYSHHERGAAFDRPRHYNTDYYRDRAMFSSAVG
SSTAASAMASGFDAPEPHFESRIRDPFALSSATRRDPYRDDRGRRVDRTYHHHRRSRSSH
SSQSRHPSPQRTTGQTSKNPHSPKRAPVSPSRGPRSQSRSRSSSSDSVSSTSSTGSGSSD
SNSSSSGGSRARSVQSSATHAPPAPPPLSIDGDEPRRSFGIRVQNLPVRSTDTSLKDGLF
HEFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALSVSKGKLFFGMMIEVTAWNGPET
ESENEFRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGVP
QYAFVQYSDIASVCKAIKKMDGEYLGANRLKLGFGKSMPTTCVWLDGLSSNITEQYLTRH
FCRYGHVVKVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFY
RSMQASGQDIRDFYEIPTERREERRPPFHEFPAERAYYENVRTPGLYTDDPRRDFPGRSR
DRYSELDHYPSEHYDPRFHEDPREYRDYRDPFEQDMRKYTYIQRERERERERFEADRGRW
SPSHQRRPVTPSASPSPSERVPRETERRVYRHSSERSGSCSSLSPPPAQFEKPEKSPVDY
KTEGLEREMESVEMERVGGAERSRRGRRKDKGDKEKGERGKSRRGKMPSPVSHSETDKEA
SLDANSNKGKASDTDGPEKSRYKGENEPSPSEQMSRLEPQKGERLDAVKGDSSDREGKGR
LKKHQKSDLGSEGKDLILESDRLAARKRRFGDPSGKTIRQKRSRMEDEGIQSPEFGSNST
LAKETEDIKALEKDTQKREHLKPKVERGTCHYSLKEDQDSSSMSSMRGQGLCSVVRQGEP
SDLDDHDSGKNLSGPSVSRRFSHDETLDQENKSREEYISLDIDLSQSYRKQMEQNRRLRQ
QLQEPDKLGKPGSPQSLDAEDLEHRSLVHEVGKPPQDVTDNSPSSRNKKQDTFELDMSSK
RERVYRSFRPKSEDPEWINANSPKPQQSSQNTEEEIIDMPHLMTVKDVKELPKSEETVHP
DLELSVKRVHTTQMAKISSHLHGSVDDAHKRWENRLKQDLLPDLSFSGRKRLGHKHLEYG
LWHDLEPGEVRSDSEEDREHKSSSPMPSTSLSLPERQRGDRLSESKLSTSLERNKFYSFA
LDQTITPDTKALLERAKSLSSSREDNWSFLDYDSHFASFRSRKDTEKVESTPRPTPSWYM
KKKKIRSESEDKLDDRKEDPKPEEQERRELFASRFLHSSIFEQDSRRLQHLERKHEDSEQ
SIGYQSTQQGAVEGQADSEPVVLFHSRFLELTRLQHKNIKELKEPQQEIKREEIIDGSRM
DKPQEEESQDQPQPVFQPAIEPALDSETKPVSPILPLPLALVAQPAKEMSPPLEKNIVQS
NSPKSSVLCVKEENECEKTPVPPQQQMQEEEQPSISPVLSEPQLMELKEPINYEQTEPSI
KSEKDMNEEQISSVEYKPSEVTETSVELELKPEPEVSNLPSSASPTLVEDIETLKTESSP
IDDEPQVKQEVDHSSVDTLSVGEPVSPPQKSKSKKTKASPTMPVAPLASPSSADKQATRK
SERIDREKSKRASSPRGEKSSSKSPVQGPEMEQVTEQRRRRRNVKSVYATPVEDESTAQP
SKEVEQPRATRKRGGDKEVAHLQQSEQDILAVPIASRRGRPPKNRSKGEDASALKSKIAE
TKEIEGIELGNSENVLKSSKGKHSPHSQKQQTSQAPVSSTSSKKADKLSDTSQQADLSED
INVPDSAPQSDFVSPGGEKTTENPKQSTEEGQQKDNVVTDRATGNKSDKPIEPPVVEESP
QAEKSGGRSKAARLIRNTKLPTEDKSLVLKNLRIRLDMTEVKAMLQTGEEDIEMEELNKK
TELLPKDQAMESSQENEVTQSDNDEAPSDSIITNPAESLLSREIELEQAVENIAKLTEGP
SPQPFKSPTTEAPSPVVPPPVEPEPPTIVEKPANPASETELAAAIDSITSEEPSCALPQE
PATNTVMESEPAIQPFVTDSKVVEPSLGSAPIQEETGPSGTPRKGAKGRAKTTKRSKTQK
PAASRKDSVKDSVAEPDSTQMSVPDPVIDTNAVADNPSATSIVITSPSKLNASLNVSHPT
DGISEEPLNDEPTHVRSAGLVNKSPNILKPPQPYECTPLSPTSLCIKPSHSSKLPLSPTD
RFNQSRETPMVPVAQGENQTVSPGLETHDPDSSNSDLRKILMKPKNIPLSGTNTAPGTML
THPPRESESPSDMVANKTPLPESRHSYLPAQPVVRSPGSLPSTETKQLFGEKTVISVIAS
TATSVISRICNTPESEEKANIPRNNPYVEKQLPKQMFQTSMEESSTYHGATVGDEGGNAG
RFVVESATLSTGPSPGLRVNTSEGVVVLSHSGQKMEGPQRISAKISQIPPASPADMESQQ
LVSMPQMKPDHYAQAPSAKCPLVPSDHGHSHKTQSGVSTKQENSLDKMDAYQAGGQSGVV
KRLQQSGGNQQVMSYHHSDFPMLMKHPKKAEGAEPLSDGAKPPWASAISPAISPHLPSSA
GNPVGFLPNTPTDRGPSHLSGIKEPRSPRKSGHPHSPFTKVSPIGSSSPKAMPVVLPSGL
PPMSQYVPNVHHPEQSVIMPPHSSHGSIGRMSPHRVGQTIPIGHLSQGDVRVNTPPLAMM
NYGMHSDQLSSPWSGPPQQCPTSPQAGGGRDMVLKVNPGNARAHEANEEDARRYQALGRP
AATSLKPETLPQEYRGALHSGLSLDRYNIAQRDMRVLMHHQQGERPATELHQGPEPVPSS
SSATSITASLSPRAHLLAKNIPEKDTLKSSEVNRPLSPVTKEGIIGIRGAMPAIASPQRI
QLLTSGTSPAFSEYPAVYTNIRSVPSQFAENSPLNISQAPHIASTQAPQDPDRSQTLNEG
KGEPMEHQSVNMVQLLTKYPIIWQGLLALKNDTAAVQLHFVYGNKALAVRSLPLQEGGAL
LRIVQRMRLEASQLESVARRMTGDSEFCLLLAMPCGRDQDDVRSQTQFLRTAFINYLQAK
LAAGIINIPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLSRISSICPQHLMIVITSV
NT seq
9720 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgagaggag
aaaattgttgagcattttaaacgctatggccgtgtggagagtgttaaggtcctgcggaaa
cgtggctcagagggtggggtggcggcctttgtggattttgtggacatcaaaagtgcacag
aaggctcacaatgctgtcaacaagatgggtgaccgggacctacgcactgattacaacgag
cccggttcagtgcccagtgccgtacgagggctggaggacaaccctccctctagcagtcac
gccagggaagtttcggggttctcacgggctgcggttggtcctgtttatgggccccccgtg
tccctccacggcagagagggacgctatgaacgcagaatagacggcagctctgacagtcga
gagcgtacctacgaccatagtccctacagtcaccatgagcgcggggcagcctttgaccgg
cctcgccactacaacacagactattaccgtgaccgtgccatgtttagctcggctgtgggc
tctagcactgcagctagtgctatggccagtgggtttgatgcccctgagcctcactttgag
tcacgcatacgtgacccctttgcactgtccagcgccacacgccgcgacccttaccgtgat
gaccgggggcggcgagtagaccggacttatcaccaccaccgtcgcagccggtcttcacac
tcctcgcagtcacgccatccctcgccacagcggaccactggccagacttccaaaaacccc
cactcccccaaacgagcccctgtctcccctagcagagggccgcgctcacagtcgcgctcg
cgatcatccagttcggactctgtaagcagcaccagcagcacgggtagtggcagcagtgac
tccaacagcagctccagtggggggtcacgagcacgctcagtgcagtcatccgctacacat
gcaccccctgcccctccccccctatcaatagatggtgacgagcctcgcagaagttttggc
attagggttcagaacctacctgtgcgttctacagacacaagtttgaaagacggactcttc
cacgagtttaagaagtatgggaaggtgacatctgttcagatccatggggcgtctgaagaa
cggtacggactagttttctttaggcaacaggaggaccaggaaaaagcactcagtgtctcc
aaaggaaaactcttcttcggcatgatgattgaggtcactgcctggaatggcccagagaca
gaaagtgagaatgaattccgcccactggatggaagaatagatgaatttcatcctaaggca
actcgcactctttttattggaaatttggaaaagactaccaactaccagcagctattggat
gtgtttcagcgctttggagagatagtggacattgacatcaaaagggttaatggtgttccc
cagtatgcctttgtgcagtattctgatattgccagtgtttgtaaggctataaagaagatg
gatggagaatacctaggagccaaccgactaaagcttggttttgggaagagtatgcccaca
acatgtgtctggctggatggtttgtcctccaacatcacagaacagtacctcaccaggcat
ttctgtcgctatgggcatgtggttaaggtagtgtttgaccgattgaaagggatggctctc
attttgtacaacaataccgactttgcccaagcagctgttagagagaccaaaggttggaag
attggtggcaacaaaattaaagttgattttgccagtcaagagagtcagatggccttctat
cggtccatgcaagcctctgggcaagacataagggacttctatgaaatcccaacagagagg
agagaggaacggaggcctccttttcatgaattcccagcagagcgggcatactacgaaaat
gtgcgaactccaggtctttacactgatgatcctcgccgtgatttccctggcagaagccgg
gatcgttactctgaactagaccactatccaagtgaacactatgaccctcgctttcatgaa
gatcccagggagtacagagattaccgtgacccatttgagcaggatatgcgcaagtacacc
tacattcagcgggaaagagagagagagcgtgagcgttttgaagctgaccgtggtagatgg
agcccctctcatcagagacgtcctgtaactcctagtgcttcaccatctccttctgagcgc
gtcccaagagagactgaacggcgggtttatcggcattcttcagagcgaagtggcagctgt
agctcactgtcccctcccccggcacagtttgaaaagcctgaaaagtccccagtggattat
aaaactgaaggtcttgaaagagaaatggagtcagtggagatggaacgtgttggaggcgct
gaaagaagcaggcgagggagacgcaaggacaagggagataaggagaaaggggagagaggc
aagtcaagaaggggcaaaatgccgtctcctgtttcacattcagaaactgacaaagaggct
tctttggatgctaactcaaataaagggaaagcttcagacacagatggtcctgaaaaatct
cgatataagggtgaaaacgagccctcaccttccgaacaaatgtcccgtctagagccccaa
aaaggggagagacttgatgcagttaaaggagattcatcagatagagaaggaaaaggcaga
ctgaaaaaacatcaaaaatctgatcttggaagtgaagggaaagatttgattctggagtca
gaccgtttagcagctcgtaaaaggcgatttggtgatcctagtgggaaaaccatccgacag
aagaggagtagaatggaggatgagggcatccagtccccagagtttggatcaaattcaact
cttgcaaaagagacagaagatataaaggcacttgaaaaagatacacagaagagggaacat
ttaaagcccaaggtggaaagggggacttgtcattacagtcttaaagaggatcaagattca
tcttctatgtctagtatgagagggcaaggtctgtgttcagtggtacggcaaggtgaacca
tcagatcttgatgatcatgactctgggaagaacctgtctggtcctagtgtgtctagaagg
ttctcacacgatgagactcttgatcaggaaaacaaaagcagggaagaatatatctctctt
gacatagatctttcccagagctatcgtaaacaaatggaacaaaaccgcagactacggcaa
cagttgcaggagcctgataaacttggaaagccaggtagtcctcagagtttggatgccgaa
gacctagaacatcgcagtttagtgcatgaggtagggaaaccacctcaggatgtaacagac
aattctccatcatcgagaaacaagaagcaagacacttttgagttggatatgagctcgaag
agagagcgtgtatacaggagcttccggccaaaaagtgaagatccagaatggattaatgcc
aattctccgaaaccacaacaatcctcccaaaacacagaagaagaaattatcgatatgccc
catctcatgactgtcaaagatgttaaagagctcccaaaatctgaagaaactgttcaccca
gacctagaactatccgtcaaaagagtacacaccacacaaatggctaaaattagctctcat
ttacatggtagtgtagatgatgctcataaacgctgggagaataggctgaagcaagatttg
ttacctgatctaagtttctctggaagaaaacggcttggtcacaagcatttggaatatggc
ctctggcatgatttggagcctggggaggtaaggtcagattctgaagaagatcgagaacac
aaatcaagctccccaatgccatctacatctctctctcttccagagaggcagagaggggat
aggctgtctgagtcaaagttgtccacctctctggaaagaaataagttctattcctttgca
ctggaccagactattacacctgacactaaagctctgcttgagagggcaaagtctctgtcg
tcctctagagaagacaactggtctttcttagattatgactcccactttgctagttttcgc
agtcggaaagatacagagaaggttgagtcaacaccacggccaacaccctcatggtacatg
aagaaaaagaaaattagaagtgagtctgaagataaacttgatgaccggaaggaggatcca
aagccagaggagcaggagcgtagagaactttttgcttctcgttttcttcatagttctatt
tttgaacaagattcaagacgccttcagcaccttgaacgaaagcatgaggactctgaacaa
agtattggataccaatctactcagcaaggtgccgtggaaggacaagctgattcggaacca
gttgtgctgtttcatagcagattcttggagctgacacggttgcaacataaaaatattaaa
gaactcaaagaacctcagcaggaaatcaagagagaagaaatcatagatggcagcagaatg
gataagccacaagaagaagagtcacaagaccagcctcagccagtttttcagcctgccatt
gaaccggctttagactctgaaacaaaaccagttagtcctattctgcctctcccattggcg
ctagtggcccagccagctaaagagatgtcaccaccattggagaaaaacattgtgcaaagt
aattcacccaagtcttccgtgctttgtgtgaaagaagaaaatgaatgtgaaaagactcct
gtgcctccacaacagcagatgcaagaggaagagcagccctccatcagccctgtattatct
gaacctcagttgatggagttaaaagaaccaattaactatgaacaaactgaaccatcaatc
aaaagtgaaaaagacatgaatgaggagcaaatatctagtgttgaatacaagcctagtgaa
gtaacagagaccagtgttgagttagaactaaaacctgagcctgaggtttctaatcttccc
agctctgcctccccaacccttgttgaagacatagagaccttgaaaactgaatctagtccc
attgacgatgaaccacaagtcaagcaggaggttgaccatagttctgttgatactttgtct
gtgggggagccagtctcgccaccacaaaaatctaaaagtaagaagaccaaggcatctcca
acaatgcctgtagctcctttggcatccccaagtagtgctgataaacaagccactcgtaag
agcgagaggattgatcgagagaagtcgaaacgtgcctcttctccacggggagagaagtcg
tcaagtaaatctcctgtacagggcccagagatggagcaggttacagaacaaaggcgaagg
cgacgaaatgtaaagtctgtgtatgccactccagttgaagatgagtctactgcacagccc
agtaaggaagtagagcaaccacgtgcaactaggaaacgaggaggggacaaggaagtggca
catttacagcagtcagagcaggacatacttgctgtaccaatagcctcaaggcgaggacgc
cctcctaagaatcgatccaagggagaggatgcatcagctctgaagtcaaaaattgctgag
acgaaagagattgagggcatagaattaggaaacagtgaaaatgtcttgaaatcttcaaaa
ggtaaacattctcctcactcacagaaacaacaaacaagtcaagcacctgtgtctagcact
tccagcaagaaagcagacaaactttctgataccagccagcaggctgatctttctgaggat
atcaatgtgccagattcggctccccaaagtgattttgtttccccaggaggagagaaaacc
acagagaatccaaaacagagcacagaagaagggcaacaaaaagataatgttgttacagat
agggctactgggaacaaaagtgacaaacctattgagcccccagttgtggaggaatctccc
caagctgaaaagagtgggggaaggtctaaagcagcaagattaattcggaatacaaaattg
ccaactgaagacaagtcccttgttctcaagaatcttcgaatcaggttggacatgactgag
gttaaagcaatgcttcagactggtgaagaagacattgagatggaggaattgaacaaaaaa
acagaacttttgcccaaagatcaagctatggaaagctctcaagaaaatgaagttacacaa
agtgataatgatgaggcaccatctgactctataatcaccaacccagctgaatctcttcta
tctcgtgagattgaacttgagcaagctgtagaaaacattgctaaacttacagagggtccc
agcccccagccattcaaaagccctacaaccgaagcacctagtccagtggttccacctcca
gttgaaccggagcctccaactatagttgagaaacctgctaatcctgctagtgaaactgag
cttgctgctgctattgattccattacatccgaagagccttcctgcgcattgccacaagag
cctgccaccaacactgttatggagtcagaaccagcaatccagccatttgtaactgattct
aaggttgtggaacctagtttaggcagtgctcctattcaggaggagacaggtccatcagga
actcctaggaaaggagctaaaggcagagctaaaacaactaagaggtcaaaaacccagaag
cctgctgccagcagaaaagattctgttaaagatagtgtagcagaacctgacagcacgcaa
atgagtgtgccagatccagttatagacactaatgcagttgcagataatccatcggcaact
tcaatagttataacctccccttcaaaattgaatgcgtcattaaatgtgtcacatccaaca
gacggcatttctgaagaaccactcaatgatgaacccacacatgtaagatctgcgggtctt
gtgaataaaagtccaaatattcttaaaccaccacagccctatgagtgtacccctctttct
ccaacatctttatgcatcaaaccctcacacagtagcaagcttcccctctctccaacagac
cggtttaatcagtctagggagaccccaatggtaccagtagctcaaggagaaaatcaaaca
gtgtcaccaggacttgaaacccatgaccctgactcaagtaacagtgacttgcgtaaaatt
ctaatgaagcctaaaaatatccccctctcaggcaccaacaccgcaccagggaccatgctt
acccacccaccaagagagagtgagtctccatctgatatggtagccaataaaacccctctg
ccagaaagtcggcattcatatttgcctgctcaacctgttgtccggtccccaggctctctt
ccatctacagagaccaaacagctctttggtgagaaaactgtgatttctgtcattgcttcc
actgccacctcagtcataagtcgtatctgtaacactcccgaatctgaggaaaaggcaaat
atcccaagaaataatccatatgtggaaaaacaacttcccaaacaaatgtttcaaaccagt
atggaggagagtagcacttaccatggagcaactgtgggagatgaaggtggaaatgctgga
cgttttgtagttgaaagtgcaactcttagtacagggcccagtcctggcttgagggtaaac
acgtcagagggtgtggtagtgcttagtcactctggtcaaaaaatggaaggaccacagagg
ataagtgcaaagattagccagattcctccagctagtcctgcagacatggaatctcaacag
ctggtttccatgcctcagatgaaaccagatcattatgcccaggctcctagtgccaagtgt
cctcttgttccctcagatcatggacattcccacaagacccaatcaggtgtctctaccaaa
caagaaaattctttggacaagatggatgcgtatcaagcaggtggtcaaagtggagttgtg
aaaaggttgcagcaatctggtggcaatcaacaggttatgagctaccatcactcagacttt
cctatgcttatgaagcatccaaagaaagcagaaggagcagaacctctcagtgatggggct
aaacccccctgggcatctgccataagtccagccataagccctcatcttccatcgtcagct
ggcaatcctgttgggttcctacccaacactcctactgatagaggtccatctcacctcagt
gggattaaagagcctcgttctcctcgcaaatctggccaccctcattctccttttaccaaa
gtgtctcctattggctcctcctctccaaaagccatgcctgtggtcctaccctctggctta
ccgcccatgtcgcaatatgtcccaaacgtccatcacccagaacagtcagtcatcatgcct
ccacacagcagtcatggaagcatagggagaatgtcaccacaccgtgtcggccagaccatt
ccaattggacacttgtctcaaggagatgttagagttaacactcctccattggctatgatg
aattatggaatgcattctgatcaattgtcatcaccatggtcggggcctccccaacagtgc
ccaacatctcctcaggcagggggaggcagagatatggttctaaaggtcaatcctggcaat
gcaagggcacatgaggcaaatgaagaggatgcaagacgataccaggccttgggaagacca
gcagccacttccctcaagccagaaaccttgccacaagaatatcgtggcgctctacacagt
ggcctgtcactagaccgctacaacattgcacagagggatatgcgtgtgctcatgcaccac
cagcagggggagcgccctgcaacagaactgcaccaaggtcctgagcctgtcccatcttcg
tccagcgccaccagcataactgcttccttgtccccaagagctcacctgctggccaaaaat
attcctgagaaggacaccttgaaatcatcagaagttaacaggccactttcaccggtcaca
aaagagggaattataggcatccgtggagctatgcctgccattgcctcgcctcaacggatt
cagttgctgacatcaggaacgagcccagcattctcagaatacccagctgtgtataccaat
attagaagtgtcccttcacagtttgcagagaattcacctttaaacatcagccaagctccc
cacattgcatctacacaggctcctcaagatccagaccgcagccaaacactaaacgagggt
aaaggggaaccgatggaacaccagtctgtgaacatggtgcaacttttaacgaaatatccc
attatttggcaaggcttgttagctctgaagaatgacactgctgcggtccagttacatttt
gtgtatggaaacaaggccctggctgtgcgctctctacccttgcaagaaggaggtgctctc
ttgcgcatcgtccagagaatgagattagaggcatcacagcttgagagtgtggctcgaagg
atgactggagatagtgagttctgcctgttgctagcgatgccttgtgggcgtgaccaagat
gatgtccgtagtcaaacccagttcctccgaacagctttcataaactacctgcaggctaag
ctggcagcaggaatcatcaacatcccaaacccaggctccaatcagccggcctatgtgctt
cagatctttccgccatgcgagttctctgagagccatttgtcacggcttgcgccagacctc
ctgagtaggatctccagtatctgtccacagcacctcatgatcgtcatcacttctgtgtga
DBGET
integrated database retrieval system
