Sardina pilchardus (sardine): 134093764
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Entry
134093764 CDS
T10667
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134093764 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134093764 (tdg.2)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
134093764 (tdg.2)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134093764 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
134093764
NCBI-ProteinID:
XP_062402981
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All DBs
Position
10:complement(15033078..15037328)
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AA seq
409 aa
AA seq
DB search
MEETNSSMTLPTDYLQYWYQTSQPYFHAPEATEYHHMNNVNYNMDNVREERDMAELTVHR
EPAEYQYSAPPQPVSPQNTAMAPPAKKRGRPPKHRSEDGKIVPDNDNTPKKAKRTLDRFN
GMSPEEVMTRTLPDVITHNLDILIVGINPGLLSAYKGHHYPNPGNHFWKCLFLSGLTDEQ
LNYMHDHTLPERYGIGFTNMVERTTPGSKDLSSKEIREGGRQLVEKLKKYRPSIAAFNGK
GIYEIFCKEIFGITAKNLEFGLQPYKVPDTHTVCYLMPSSSPRCAQFPRAQDKVHFYIKL
KELRDQIKGVARTADIQETEYSFDLSLAKEDAKRMSIKEENQDPGYEAASGSWQETDQGT
SHYSLHNMDALYHGGQHDPLQFGTSTDLHSFQQSTYKTDHCTAVRHEQA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacgaattcttcaatgacccttccaacggattatctccaatattggtatcaa
accagtcagccatattttcatgcaccagaagctacggagtatcatcacatgaacaatgtc
aattataacatggacaatgtcagagaagagcgggatatggcagaactcactgtccaccgg
gaacccgctgaataccagtattctgcgccaccacagcctgtctcaccacagaatactgca
atggcaccccctgctaagaagagaggtagacccccaaaacacagatctgaggacggtaag
atagtgcctgacaatgacaacactcccaagaaggcaaaaagaacacttgatcgatttaat
ggtatgtcacctgaagaagtaatgacaagaaccctgcccgatgtgatcacccacaatctt
gacatattaatagttggaattaaccctggacttctatcggcctacaaaggacatcattat
ccaaatccaggaaatcatttctggaagtgtcttttcctctctggtctaactgatgaacag
ctcaattacatgcacgatcacacgctgccagagaggtatggaattggcttcaccaacatg
gtggagagaaccacacctggaagcaaagatctctcaagtaaagagattcgtgaaggtggc
agacaactggtagaaaagctcaagaaatacagaccgagcatcgctgccttcaatggcaaa
ggtatctatgaaattttctgcaaagaaatctttggaataacagcaaagaatcttgaattt
ggcctgcagccatacaaagttcctgacacacatacagtgtgctatttaatgccgtcatca
agcccccgctgtgcccagttcccccgtgcgcaggacaaagtgcatttctacattaagctc
aaagagctgcgggaccagatcaaaggggtggcgcggacggcggacatccaagagaccgag
tactcgtttgacctgtcgttagcgaaagaggatgctaaaaggatgtctatcaaagaagaa
aaccaagatccgggttacgaggctgccagtgggtcatggcaagagaccgaccaggggacc
agtcactactctctacacaatatggatgcactttatcatggtggacaacatgacccgttg
cagtttggaacatctacagatttacatagctttcagcagagcacatacaagacggatcat
tgcacagcagtaagacatgaacaagcctga
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