Sardina pilchardus (sardine): 134097618
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Entry
134097618 CDS
T10667
Symbol
thbs1b
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04115
p53 signaling pathway
spil04145
Phagosome
spil04148
Efferocytosis
spil04350
TGF-beta signaling pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
spil04131
]
Endocytosis
Phagocytosis
Opsonins
134097618 (thbs1b)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134097618 (thbs1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134097618
NCBI-ProteinID:
XP_062406523
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Position
12:16130540..16143922
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AA seq
1171 aa
AA seq
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MKLTGIFLLLMLWHSESARVAETRDDNNMYDLFELVQVPKKNHGVTLVKGDDPYSPAYKI
LNPDLIPPVPKNAFRDLIDSIHAERGFLLLVNFKQAKRTRGSLLTIEKQDGSGPIFEIVS
NAKANTLDIVYSTENKQQVMSIEDADLATGHWKNITLFVQEDRALLYVGCEEVNTVELDV
PIQNILNKDTPLYANLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSTILTDLI
TLDNPINGSSPAIRTDFTGHKTKDLQMICGFTCDDLAAMFKELKTLGVVVRDLSDQLNKV
TDQNRHLLASINISGGVCLHNGIVHKNNDEWTVDDCTECTCRNSAIVCRKISCPLIPCAN
ATVPDGECCPRCGTPSDFADDGWSLWSEWTHCSVSCGRGVQQRGRSCDRINNNCEGTSVQ
TRDCYLQECDKRFKQDGGWSHWSPWSSCSVSCGGGVITRIRLCNSPTPQLNGKECEGEGR
QTEKCQKSACPINGGWGPWSPWDACSATCGGGRQTRKRLCNDPAPKFGGKECIGDGTATQ
ACSKQPCPIDGCLSNPCFAGSQCTSFPDGSWKCGKCPSGYTGNGIKCKDINECKEVPDAC
FEFNGVHRCENTVPGYNCLPCPPRYTGPQPFGRGVEEAAAKKQVCTPRNPCLDGSHDCNK
HARCNYLGHFADPMFRCECKPGFAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP
NLPNSGQEDYDKDGVGDACDDDDDDDGIPDDRDNCPFVFNPRQYDYDRDDVGDRCDNCPY
NSNPDQADTDNNGEGDACAVDIDGDGIMNEKDNCPYVYNVDQRDSDLDGVGDQCDNCPLE
HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDD
NDGIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDGDNVPDIYDVCPENFDISETDFRK
FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSARFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNA
LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY
DKTYAGGRLGLFVFSQEMVYFSDLKYECRDL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaacgggaatatttttgctgctgatgctttggcacagtgagagcgcaagagtc
gcagagactagagacgacaacaacatgtacgacctattcgagctagtccaggtccctaag
aaaaaccatggggtcactctggtgaaaggcgacgacccatacagccccgcctacaaaatc
ttgaaccccgacctgatccccccggtccccaagaacgccttcagggacctaatcgactca
attcacgcggagagaggattccttctcttggtaaatttcaaacaggccaagaggaccagg
ggcagtctgctgaccattgagaagcaagacggctccggaccaatttttgaaatcgtttct
aacgccaaggccaacacactggacattgtgtattccacggaaaacaagcaacaggtgatg
tccattgaagatgcggacttggcaacggggcattggaaaaatatcactctcttcgtgcaa
gaggacagggctctgttgtacgtaggctgtgaagaggtgaatacagttgagctggacgta
cctattcagaacatcctgaataaggacacccctctatatgcaaacttgagaatcggcaaa
ggagcagtgaaagacaggttcatgggtgtgcttcagaacgtgcgttttgtctttggaacg
actcttgatgcgatcttaaggaataaaggctgccaaagcacaattctgacagacctcata
accttggacaatcccatcaatggctctagtccagcaatcaggacagatttcactggtcac
aaaacgaaagatcttcagatgatttgcggcttcacctgtgatgacctagctgccatgttc
aaggagctgaagaccctcggggtggtggtgagagacctgtcagaccagctcaataaagtg
actgaccagaacagacacctcctggccagcatcaacatcagtggcggcgtctgtctccac
aatggcattgtccacaagaacaacgacgagtggaccgtagacgactgcaccgagtgcact
tgccggaactccgccatcgtgtgccgcaagatctcctgccctctcattccctgtgccaac
gccaccgtgcccgatggggagtgctgccctcgctgtggcaccccgagcgactttgctgac
gacggctggtccctgtggtctgaatggactcattgttcggtgtcctgcggacgaggcgtg
cagcagagggggcgctcctgcgatcgcatcaataacaactgcgagggcacgtcggtgcag
acgcgcgactgctacctccaggagtgcgacaagcgcttcaaacaagatggcggatggagc
cactggtcaccctggtcctcctgctcggtcagctgtggcggcggagtcatcacccgtatt
cgcctctgcaactcgccgacgccacagctgaacggcaaggagtgcgagggagaggggagg
cagacggagaagtgccagaaatcagcctgccccatcaatggaggctggggaccctggtca
ccttgggacgcctgctcggcgacctgtggaggaggaaggcagacccgcaagcgcctctgt
aatgacccggcgcccaagtttgggggcaaagaatgcatcggcgacggcacggcaactcag
gcatgcagcaagcaaccctgccctatcgatggctgcttgtccaacccctgcttcgctggc
tcccagtgcaccagcttccccgacggctcctggaagtgcggcaagtgcccctccggctac
accggcaacggcatcaagtgcaaagacatcaacgagtgtaaggaggtccctgatgcctgc
tttgagttcaatggcgtgcacaggtgtgagaacactgttccaggctacaactgtctgccc
tgtcccccgcgctacaccggaccccagcccttcggcagaggtgtggaggaggccgcggcc
aagaagcaggtttgcactccccgtaacccctgtctggacggaagccacgactgcaacaag
cacgcccgctgcaactacctgggccactttgctgaccccatgttccgctgcgagtgcaag
cctggcttcgccgggaacggtcacatctgcggcgaggacaccgacctggacggctggccc
aacgccgacctggtctgcgtggagaatgctacctatcactgcaagaaggacaactgcccc
aacctgcccaattctggacaagaggactatgacaaggacggcgttggagatgcttgcgat
gatgatgacgatgatgatggcattcccgacgacagggataactgcccgttcgtcttcaac
cccaggcagtatgactatgaccgcgatgacgttggagaccgctgcgacaactgcccatac
aacagcaaccccgatcaggcagacaccgacaacaatggagagggtgacgcctgtgctgtg
gacatagacggagacggcattatgaatgagaaggacaactgtccctatgtctacaacgtc
gaccagcgcgactcagaccttgatggagttggggaccagtgtgataactgtcctctggag
cataatcctgaccagcttgactcagactcggaccgcgtgggagacaagtgcgacagcaat
caggacatcgatgaggacggtcaccagaacaacctggacaactgcccttacattccgaat
gctaaccaggcagaccacgacaaagacggcaaaggtgatgcctgcgaccacgatgacgac
aacgacggtattcctgacgacaaagacaactgccgtctggctttcaacccagatcaactc
gattccgatggtgatggccgtggagatgcttgcaaagacgactttgacggggacaacgtg
ccagatatctacgacgtctgcccggagaacttcgacatcagtgagaccgatttccggaaa
ttccagatggtgcctctggaccccaagggcacctcccagatcgaccccaactgggtggtt
cgccaccagggcaaagagctggtgcagacagtcaactgcgatcctggcattgctgttggc
tatgacgagttcaacgctgtggacttcagtggcaccttcttcatcaacaccgagcgggac
gatgactacgccggctttgtgttcggctaccagtccagcgcgcgcttctacgtggtcatg
tggaagcagatcacgcagacctactggtctaacaagcccaccaaggcccaaggctactca
gggttgtccatcaaggtggtcaactccaccactggccctggagagcacctcaggaatgca
ctttggcatactggagacacgccaggacaggtgcgcaccctctggcacgacccgaagaat
gtcggctggaaggacttcactgcctacagatggcatctgacacacagacccaggactggg
cacatcagggttgtaatgtatgaaggcaagaagatcatggccgattcaggaagaatatac
gataagacgtacgctggtggaagactaggtctctttgttttctctcaagagatggtgtat
ttttccgacctcaaatacgaatgcagagacttgtaa
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