Spirosoma sp. SC4-14: WBJ53_10305
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Entry
WBJ53_10305 CDS
T11499
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00020
Citrate cycle (TCA cycle)
spio00785
Lipoic acid metabolism
spio01100
Metabolic pathways
spio01110
Biosynthesis of secondary metabolites
spio01120
Microbial metabolism in diverse environments
spio01200
Carbon metabolism
spio01210
2-Oxocarboxylic acid metabolism
Module
spio_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spio_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
WBJ53_10305
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
WBJ53_10305
Enzymes [BR:
spio01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
WBJ53_10305
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Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
WXC17602
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Position
2536955..2539726
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AA seq
923 aa
AA seq
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MDQYSYIANSDAAYVDQLYQSYRQDPQSVDASWQQFFKGFEFSLTYGETANGTNGKTNGA
APNGNGLTATAKPVDASHAEKEVSVASLIKAYRSRGHLLAKTNPLKPRKDRQPRVDLPDY
ALSEADLDTVFESGKLLGIGPATLRVIMESLRKVYAGDIGFEYMYIRELEVKNWLRNKIE
KEALVFSPTIDEKKRILEKLNEATVFENFLATKYLGQKRFSLEGGEVTIPALDTIISQAA
DMGVEEVMIGMAHRGRLNVLANILGKSYESIFDGFEGNVPDQVQGDGDVKYHLGYSSLIE
TKSGKQISVKLAPNPSHLEAVNPVVEGFVRAQADEEYQGDFRKIMPILIHGDAAVAGQGI
VYEVTQMAKLAGYQTGGTVHFVINNQIGFTTDFEDARSSIYCSDVAKIVDAPIFHVNGDN
PEAVIFCARLAVEFRERFNRDVFIDMVCYRRYGHNESDEPKFTQPTMYNIIDKHANPREI
YKDLLIKRGDVDAELATRMDTEFKKQLQDRLDRVKQKEEIPYKPLRLDLDWAELRFSEPA
DFDQSPETGIPADVLETIGKALVKIPEGFKPIKQIEKLLKDRQTMLTETKMVNWGTAELL
AYGSLLIEGKPVRLSGQDVQRGTFSHRHAVLHDSETNQSYSSLDFIQEDQQKFQVYNSLL
SEYGVLGFEYGYAMANPHALVIWEAQFGDFSNGAQLIIDQFIAAAESKWGIQNGVTMLLP
HGYEGQGPEHSNARPERYLQLYAEYNMIVANITTPANFFHLMRRQLAWPFRKPLAVMSPK
SLLRHPKCVSPLEDLTKGSFQEVLGDTYAQPKKVKRVLLCTGKVYYDLLDKQQADQRDDV
AIVRLEQLAPLPKKQLDAVLSQYKKAELFWVQEEPENMGYWTYLLRIGMNIPIISRKAAA
SPATGYPKIHTREQADIVRRAFE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtattcatatatagccaactccgacgcggcttacgtagatcaactatatcag
tcttataggcaagaccctcaatcagttgacgcaagctggcaacaattcttcaaaggattc
gaattctccttaacctatggcgaaactgccaatggaacgaacggtaaaaccaatggtgcc
gcaccgaatggaaatggtctgacagctacggctaagccggtagatgccagccatgccgaa
aaagaagtttcggttgccagcctcatcaaggcttaccgctcacgtggccacctactggcc
aaaacaaacccgctaaaaccgcgcaaagaccggcaacctcgtgtcgacttacccgattac
gccttgtcggaggccgatctggatacggtatttgagtcaggtaaactactcggcattggg
cccgctacactgcgcgtcatcatggagtcgctgcgtaaggtatatgcaggcgacatcggt
ttcgagtatatgtacatccgcgaactggaggttaaaaactggcttcggaataaaattgaa
aaagaagcccttgttttctcgcctaccattgacgaaaaaaagcggattctggaaaaactg
aatgaagctaccgttttcgaaaacttcctggctacaaaataccttggccagaaacgattt
tcgctggaaggtggcgaagtaacgattccggccctcgataccattatcagtcaggctgcc
gatatgggcgttgaagaggttatgatcggtatggcccaccgggggcgtctgaacgtatta
gccaatatcctggggaaatcctacgaatctattttcgatggtttcgaaggaaatgtaccc
gatcaggttcagggcgatggcgacgttaaatatcacctcggctattcgagcctgatcgaa
acaaaatcgggcaaacagatcagtgtgaaactggccccaaacccatcgcacctcgaagcc
gtaaatccagttgttgaaggatttgtacgggctcaggccgatgaagagtatcagggtgat
tttagaaaaattatgcctatcctcattcatggcgatgcagccgtggccgggcagggtatt
gtgtatgaagttacgcagatggccaaactggccggttatcaaaccggcggtacggttcat
tttgtgattaataaccagattggcttcaccaccgattttgaagacgctcgttcgtcgata
tattgttcggatgtagccaaaattgttgacgctccaatttttcacgtcaatggcgataat
ccggaagctgtgattttctgtgcccgactggcagtcgaattccgtgagcgcttcaatcgt
gatgtgttcatcgacatggtatgttatcggcgctatggacataatgagtccgatgaaccg
aaatttacgcagccaaccatgtataacatcatcgacaagcatgccaacccacgggaaatc
tacaaagacctgctcatcaaacggggcgatgtcgatgctgagctggctacccggatggat
accgagtttaagaagcaattgcaggatcgactcgaccgggtgaagcaaaaagaggaaatt
ccgtataaaccacttcggttagatctcgactgggcagagttacgattcagtgaacccgcc
gattttgatcagtcgccggagacgggtatacctgccgatgtgctcgaaacgattggtaaa
gcattggtgaaaattccggaaggtttcaaaccaattaagcagattgaaaaactgcttaaa
gaccggcaaacgatgctcaccgaaacgaaaatggttaactggggaacggctgaattacta
gcttatggttcgttgctgattgaaggaaagccggttcggttaagtgggcaggatgtgcag
cgaggcaccttctcgcaccgtcatgctgtattgcacgattcagaaacgaaccagtcgtat
tcctcgctggactttattcaggaagaccagcagaaatttcaggtatacaactcgctattg
tctgaatatggcgtactgggatttgaatatggttatgcaatggctaatccccatgcactg
gttatctgggaagcacagtttggggatttctcgaacggagcacagttaattatcgatcag
tttattgcggctgccgaatcgaaatggggtattcagaatggcgttacaatgctgctgcca
catggctacgaaggccagggccctgagcactcaaacgctcgcccggaacgctatttgcag
ctatatgctgagtacaatatgattgtggctaacattacaacgcctgccaatttcttccac
ctgatgcgtcgtcagttggcatggccgttccgtaagccacttgctgttatgtcgcctaaa
tcgttgcttcgccacccgaaatgtgtttcacccctggaagacctgaccaaaggaagcttc
caggaagtactgggcgatacatacgcgcaacccaaaaaggtaaaacgggtactgttgtgt
acgggtaaggtctattacgacctactcgacaagcagcaagccgaccagcgcgacgatgta
gctattgtacgattggaacagctagccccgctacctaaaaaacagttggatgctgtgctg
tcgcaatacaaaaaagcggagctgttctgggtgcaggaagaaccagaaaatatgggatac
tggacctatttattgcgtattggaatgaatataccaataatttcgcgcaaggcggcagct
tcgccagcaacgggttaccccaaaatccatacgcgggaacaagccgatatcgttcggaga
gcttttgaataa
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