Spirosoma sp. SC4-14: WBJ53_28750
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Entry
WBJ53_28750 CDS
T11499
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00300
Lysine biosynthesis
spio00550
Peptidoglycan biosynthesis
spio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WBJ53_28750
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WBJ53_28750
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spio01011
]
WBJ53_28750
Enzymes [BR:
spio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
WBJ53_28750
Peptidoglycan biosynthesis and degradation proteins [BR:
spio01011
]
Precursor biosynthesis
Amino acid ligase
WBJ53_28750
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
WXC14969
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Position
complement(6967195..6968673)
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AA seq
492 aa
AA seq
DB search
MQLKDLLYKIPLLATSGSMATDITSLTMDSRKVGPGSLFIAVRGTVSDGHTFIDKAIRQG
AVAILCQELPTTPDPAVAYIQVTDSARTMGLVAANFYNQPSQKLKLVGVTGTNGKTSVAT
LLFRLFRGLGYRCGLLSTVQNQIDDQIIPATHTTPDVITINQLLTQMLANGCTHVFMEVS
SHAVVQERIAGLAFTGGIFTNITHDHLDFHGTFDNYIRAKKGFFDQLPATAFALTNVDDK
RGLVMLQNTAARKETYSLQTLATFKGKVLADSLFGLNMLVDDKEVWFKLIGKFNAYNLLS
VYGAAVLLGEDPAEILTLLSGITPPPGRFEQVVSDDKIVGIVDYAHTPDALQNVLETINE
IRQDDDQGYLPQVITVVGCGGNRDAAKRPIMADIACRYSNRVILTSDNPRNEDPMVILEQ
MQAGVSAVDHKKTLTIEDRHEAIRRAVAMAKPHDIILVAGKGHETYQEINGIKYDFDDRI
VLRNAFAERGNL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaaagacctcctttataagattccgctgctggcaacgtcgggcagcatggca
accgacattaccagcctaactatggattcccgaaaagtgggtcctggaagtttatttatt
gccgtccgcggaaccgttagcgacggacatacattcattgacaaagcgattcggcaggga
gccgtggccattttgtgccaggaattgccgacaactcccgatccggctgttgcatacata
caggtaaccgattcggcccggacaatgggacttgttgctgctaacttttataatcagccg
tcgcaaaagctaaaactcgttggggtaaccggtacaaacgggaagacttcggtggcaacg
ttgctatttcggctgtttcggggacttggttaccgctgtggcttgctctccaccgtacaa
aaccagatcgacgatcagattattccggctacgcacacaacgcccgatgtaattacgatc
aatcagttgttgactcaaatgctggcaaacgggtgtactcatgtgtttatggaagtgagt
tcgcacgcggttgtgcaggagcgtattgccgggctcgcctttacgggtggaatttttacc
aacattacgcacgatcacctcgattttcacggtacgttcgataactacattcgggctaaa
aaaggattttttgatcaactgcctgctacggcatttgccctcacgaacgttgatgacaaa
cgtggtctggtcatgttacagaatacggccgctcgtaaggaaacgtattcgttgcaaacg
ctggcgacttttaaagggaaagttctggccgacagcttgtttggcctgaatatgctggtc
gatgacaaagaggtctggtttaagctcattggcaagtttaatgcctataacctgctcagc
gtttatggagcagccgtattgctgggcgaagaccctgccgaaattttaacacttctttcg
ggcataacaccaccgccgggccgctttgaacaggtcgtttcggatgataaaattgttggc
attgtcgattatgcccatacgcccgatgcactgcaaaacgtgctggaaactatcaacgaa
atccgtcaggacgacgaccaggggtatctgcctcaggttattactgttgtgggctgtggc
ggcaatcgggatgcggccaagcgccccattatggccgatatagcctgccgatatagcaac
cgcgttattctaacatccgacaatccccgtaatgaagacccgatggttattctggaacag
atgcaggctggcgtttcggcggtcgaccacaagaaaacgctaacaatcgaggatcggcac
gaagcaattcggcgggcagtagcaatggctaagccgcacgatattattctggtagctggc
aaaggccacgaaacgtatcaggaaatcaacggaataaagtacgattttgatgatcggatc
gtgctgcggaacgctttcgcagaacgcggaaatctgtaa
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