Spirosoma pollinicola: CWM47_07830
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Entry
CWM47_07830 CDS
T05236
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spir
Spirosoma pollinicola
Pathway
spir01501
beta-Lactam resistance
spir01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWM47_07830
01503 Cationic antimicrobial peptide (CAMP) resistance
CWM47_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spir03036
]
CWM47_07830
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_07830
01504 Antimicrobial resistance genes [BR:
spir01504
]
CWM47_07830
Chromosome and associated proteins [BR:
spir03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CWM47_07830
Transporters [BR:
spir02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWM47_07830
Antimicrobial resistance genes [BR:
spir01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWM47_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
YknX_C
HH_MFP_RND
Beta-barrel_RND
BSH_CzcB
Beta-barrel_RND_2
HH_EMRA
BSH_CusB
CzcB_C
HH_YBHG
HH_AAEA_pHBA
BSH_YknX
Biotin_lipoyl
BSH_LcnD
SurA_N_2
Motif
Other DBs
NCBI-ProteinID:
AUD07212
UniProt:
A0A2K8ZBF2
LinkDB
All DBs
Position
1847754..1848923
Genome browser
AA seq
389 aa
AA seq
DB search
MKQYINLSIISAVITVTFWACGGKKDDQQQAPPPPTAVSAVKAEKGNATYYDQFPATVTA
LLEVEIQPQVSGNITGIFFQDGQQVRKGQKLYTIDPQQYRAGYDQAVANLNVQKANLNRA
QKDANRYNTLAEQDAVAKQLVDNANATLEAAKMQVEASQAAIQQVATNLKYTTIYAPLDG
TIGISQVRLGAAVAPGSTPLNTISSDNPIAADLQVDASEIPRFQKLQNQKNTGRDSTLVL
TMPDGRNYKYPGSVRIIDRAVDPQTGTLRVRIAFPNPDKQLKVGINANVRVKNSTGEPQL
LIPYQAVTEQMSEYFVFVVGDSSKVTQKKVTLGARINDKVIVKAGLKEGETVVTEGTQKI
REGAKVRVTQAGQQAGPKQDSSSKQTAAK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatatattaatctgtcgattattagcgctgttatcacggtaactttttgggcc
tgtggtggtaaaaaagatgaccagcagcaggcacctccgccaccaactgccgtttcggcc
gtaaaggcggagaagggaaatgcaacctattatgatcagtttcccgccacggtgaccgcc
ttgcttgaggtagaaattcaacctcaggtgtcgggtaatatcacaggcatatttttccag
gatggccagcaggtgcgtaaggggcagaaactgtatactattgatcctcagcaataccgg
gccggttacgatcaggcagtagcgaaccttaacgttcagaaagcgaatctcaaccgggct
cagaaagacgccaatcggtataatacactggccgaacaggatgccgtagccaaacaactg
gtcgataatgcaaatgccacgctggaagcggctaaaatgcaggttgaagcgtcgcaggca
gctattcagcaagtagccacgaacttgaaatacacgacgatttacgccccccttgatggt
acaatcggcatctcgcaggtgcgccttggtgccgccgttgcaccgggctcaacgccactt
aacacgatctcgtctgacaatccgattgcggctgacttacaggttgatgcgtctgaaatt
ccacgatttcaaaagctgcaaaaccagaaaaatactggccgcgactcaacgcttgtactg
acgatgcctgatggcagaaattataaataccccggttctgtgcgcattattgaccgcgcc
gtagacccgcaaacgggtacgctgcgtgttcgtatcgctttcccgaatccagacaaacaa
cttaaagtaggtataaacgccaatgttcgggtgaaaaacagtacgggcgagccgcaactg
ctgattccgtatcaggctgtaaccgagcagatgagcgaatactttgtgtttgtggtaggc
gacagcagtaaagtgacccagaagaaagtaacgctgggtgcccgaattaacgataaagta
atcgtaaaagcaggtttgaaagaaggcgaaaccgtcgtaacggaaggcacgcaaaagatt
cgtgaaggcgcgaaagtacgtgttacccaggctggtcagcaggctggccccaaacaagat
tcgagcagtaaacagacggcagcaaaataa
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