KEGG   Spirosoma pollinicola: CWM47_28800
Entry
CWM47_28800       CDS       T05236                                 
Name
(GenBank) DNA lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
spir  Spirosoma pollinicola
Pathway
spir03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CWM47_28800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spir03400]
    CWM47_28800
Enzymes [BR:spir01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CWM47_28800
DNA repair and recombination proteins [BR:spir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CWM47_28800
 Prokaryotic type
     CWM47_28800
SSDB
Motif
Pfam: HhH-GPD HHH Ogg-HhH
Other DBs
NCBI-ProteinID: AUD05495
UniProt: A0A2K8Z6J9
LinkDB
Position
complement(6840448..6841110)
AA seq 220 aa
MKPNFDLNVVLAHIDEAIRPYPKAAMFDLFERGYNTLFEQLISCIVSIRTLDETTIPVSL
RLFERARTPEQLLALDVATLTQLLYGTTYPDQKAYTMLGIAERIVNEFNGELPANYETLT
SLKGVGPKCANLALGVATGQAAISVDVHVHRVVNRWGYVHTKQPEQTLKVLETQVPHEQW
VNINRLLMPFGKHICTGTLPHCSTCPVLAWCEQVGVERHR
NT seq 663 nt   +upstreamnt  +downstreamnt
atgaaacccaacttcgaccttaacgttgttctggcccatatcgacgaagccattcggcct
tacccaaaagcggctatgttcgatttgtttgaacgcggctataataccctgttcgagcaa
ctgatttcgtgcatcgtgtcgatccgaacgctcgatgaaacgaccattccggtatcactg
cgcctgttcgaacgcgcccgaacacccgaacagctccttgccctcgatgttgccacactg
acccaattgctgtatggcacaacataccccgaccagaaagcctataccatgctgggcatt
gccgaacggattgtgaatgaattcaatggggagttacccgccaactatgaaacattgacc
tccctgaaaggagttgggccgaagtgtgcaaatctggcgttgggggtggcaacgggacag
gccgctataagcgtcgatgttcatgtgcatcgggttgtcaatcggtgggggtatgtgcat
accaaacaacccgaacaaaccctgaaagtgctggaaactcaggtgcctcatgagcagtgg
gtaaacatcaaccggctcctcatgccgttcggtaaacacatctgcaccggtacactgccg
cactgctcaacgtgcccggtgctggcctggtgcgagcaggtaggggtggagcggcaccgg
taa

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