Stylophora pistillata (Smooth Cauliflower Coral): 111330715
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Entry
111330715 CDS
T05774
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04120
Ubiquitin mediated proteolysis
spis04140
Autophagy - animal
spis04144
Endocytosis
spis04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111330715
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111330715
04140 Autophagy - animal
111330715
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111330715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spis04131
]
111330715
04121 Ubiquitin system [BR:
spis04121
]
111330715
Enzymes [BR:
spis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111330715
Membrane trafficking [BR:
spis04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111330715
Ubiquitin system [BR:
spis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111330715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
TRAF3_RING
zf-Nse
zf-RING_5
zf-RING_4
CENP-H
zf-TRAF_2
TMF_DNA_bd
zf-RING_6
ABC_tran_Xtn
DUF641
zf-C3HC4_4
DUF3450
Sina_RING
Bacillus_HBL
FAM110_N
TMPIT
Motif
Other DBs
NCBI-GeneID:
111330715
NCBI-ProteinID:
XP_022791353
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MDARSRAAAALLLDFLERSENDEEFEGEFDQELSDDFDDRSSDEEEQTRPTLGGYEYEFV
DNVSDNQICPVCLLPMRDAVQTKECGHRFCKDCLHGILRSDHPVCPNDRQNIKRKGGFFS
DKAWARDILCLRVKCKQSATGCDWIGQLRHVEEHQKNCLYEQEQCRDCEANIQRRHLDNH
YKEECPKRIVECVHCHKTFRFFKKALHESSLCSRYPLRCTNNCGALQIPREELKRHISDQ
CPLTEVTCPYAKAGCPYKDKRVHLSRHMETSVDNHLWLTWYSLVETKQELGNLKDLRQKY
IKVQLVNERLTQSSAEFVEEIRDLSAAVKRLEAQNAKQVKQIEDLTRKLEKVQKPGKAHS
SRKSTLNNSY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagaagcagagcggctgctgccttactgttagatttccttgaacgatccgag
aacgacgaggagtttgaaggagaatttgatcaggaattgagcgacgatttcgatgatcgt
agcagcgacgaagaagaacaaactcggccgacgttgggaggctatgaatacgaatttgtt
gataacgtttcggacaatcaaatatgtccggtgtgccttttacctatgagagatgcggtc
caaactaaagagtgcggccatcgattctgtaaagattgcttgcacggaattctgagaagt
gaccacccagtttgtccgaatgacaggcagaatatcaagcgaaaaggcgggttcttttct
gacaaagcctgggctagggatatcttatgtcttcgtgtaaagtgcaaacagagcgccaca
ggatgtgactggattggtcaactgcgacatgtggaggaacaccaaaagaactgtctctat
gaacaagagcagtgccgcgattgtgaagcaaatatacaaagaagacacctcgacaatcat
tacaaggaggaatgtccaaagagaatagtagagtgtgttcactgtcataaaacgttccgt
ttcttcaaaaaagccttacacgagagcagtttgtgcagccgataccctctccgctgcact
aacaactgtggagccttgcaaataccacgagaagagctgaaaaggcacatttccgatcaa
tgcccgttgactgaggtgacctgcccctatgccaaggccggatgcccttataaggataag
agagttcaccttagcagacatatggagaccagcgtggataatcacttgtggctgacatgg
tattccctcgtggaaacaaaacaagagctcggcaatctgaaagatctgcgacagaaatat
atcaaggttcagcttgtcaacgagagactgacgcagtcctcggctgaattcgttgaagag
attcgcgatttgtcggcagctgttaaacgattggaggcacaaaacgccaaacaagtgaag
cagatcgaagacttgactaggaaacttgaaaaagttcaaaagcctggcaaagctcactcg
tcaaggaaaagcacgcttaataattcttactga
DBGET
integrated database retrieval system
