Stylophora pistillata (Smooth Cauliflower Coral): 111344690
Help
Entry
111344690 CDS
T05774
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis04120
Ubiquitin mediated proteolysis
spis04140
Autophagy - animal
spis04144
Endocytosis
spis04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111344690
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111344690
04140 Autophagy - animal
111344690
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111344690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spis04131
]
111344690
04121 Ubiquitin system [BR:
spis04121
]
111344690
Enzymes [BR:
spis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111344690
Membrane trafficking [BR:
spis04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111344690
Ubiquitin system [BR:
spis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111344690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
RING_XB3-XBAT31
MAD
Crescentin
ATG16
SlyX
TRAFD1-XIAF1_ZnF
TMF_DNA_bd
Sina_ZnF
Nuf2_DHR10-like
zf-RING_6
Nup54
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
111344690
NCBI-ProteinID:
XP_022807668
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MNRGFRLEEQHPLFLRDSSFEPSFEVAATEFRYPSVEVEPRSEGYDEYFDPPLESKYECP
ICLLGLREPVQTSCGHRFCKGCIVRSIRDAGPKCPVDNERLSESQLYPDNFAKREMMDQD
VFCRMKKQHGCTWKGKLGKLQEHLNVCDFIDVKCPKKCGREMQRKDLKEHLEKECPNRTL
PCKHCKNEIMWNELEDHYGNCPKFPVKCDSCKKENIPRESLKEHLDKECPAVKLKCPFYI
VGCLYEGLRIAVIEHVTKELPNHAMEMAKKLGELVETGSGSHDMGGQRNASGTQRPRGGA
EAFPREQASQEGYLHDLSSRTQTQRDEIDELRRKVAEMSNLIHHLERQLEETRMRQERPI
QELTLRFNRYETKLLEVEGRLCNGSYIWKIDNFRQCRQDAVNGVMTAIHSPAFHTSLYGY
KLCMRINLNGVDSGVGKHVALFVHMMQGDYDSILEWPFTGRIALSILDQSDGAEYRHHIS
ETLVAKPNLLAFQRPTAPRNYKGYGYVEFAPIDTIREPQYVRNNTMLVRIQIFH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtggctttcgtttagaggagcagcatcctctattccttcgtgatagctctttt
gagccaagttttgaagtagcagcaaccgaattcaggtatccatcagtcgaagttgaacca
aggtctgagggatatgatgagtattttgatccacctttggaaagcaagtatgagtgtcct
atctgtcttttgggactgcgagaaccagtgcagacaagctgtggtcacaggttctgtaaa
ggctgtatagttcggtccatacgagatgctggtcctaaatgccccgtagataatgagcgc
ttaagtgaatcacagctttatccagacaactttgcaaagcgggaaatgatggatcaagat
gtattctgtcgtatgaaaaagcaacatggctgtacttggaagggaaagcttggcaagttg
caggagcatttgaatgtttgtgactttattgatgtaaagtgccctaagaagtgtggaaga
gaaatgcagagaaaggatcttaaagaacatctggagaaagaatgtcccaacagaacacta
ccttgcaaacactgcaaaaatgagataatgtggaatgaattggaggaccactatgggaac
tgtcccaaatttcctgtcaagtgtgacagctgtaagaaagaaaacattccaagagaaagc
ctgaaagaacatttggacaaggaatgtcctgctgtgaaattgaaatgtcctttctacatt
gttggatgcttatatgagggtctgcgaatagcagtcattgaacacgttactaaagagtta
ccaaaccacgcaatggagatggccaagaaacttggtgagttggtggaaactgggtctggc
agtcatgacatgggggggcagagaaatgcgagtggtacacagcgaccgaggggtggggcg
gaggcttttcctcgggagcaggcgagccaagaaggatatttacacgacttgtcaagcagg
actcagactcagcgagatgagattgacgaattgaggcgcaaggtcgctgagatgagcaat
ttaatacatcacctggagaggcagctggaggaaactcgtatgagacaggaaaggccgatc
caagagttgacattaagattcaacagatatgaaacaaaattgttagaagttgaggggcgc
ttatgtaacggatcgtatatttggaagatagacaactttcgacagtgccgccaagatgcc
gtcaatggggtgatgacagcaatccacagcccagccttccacactagtctctacggatat
aaattatgcatgaggatcaaccttaacggtgtcgatagcggtgttggaaaacacgtggct
ctgtttgttcatatgatgcagggtgattatgacagcattctggaatggccttttaccgga
agaattgctctgtccattttggatcagtctgatggcgctgaataccgtcaccacatcagt
gagaccttggtggccaagcctaacctgctggctttccaaagacccacagccccgcgtaac
tataaagggtatgggtatgtcgagtttgcaccaattgatactatccgtgagccgcagtat
gtcagaaataataccatgctcgtacgaattcagatttttcattaa
DBGET
integrated database retrieval system
