Spiribacter sp. 2438: GJ672_00445
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Entry
GJ672_00445 CDS
T06294
Symbol
odhB
Name
(GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz00020
Citrate cycle (TCA cycle)
spiz00310
Lysine degradation
spiz00380
Tryptophan metabolism
spiz00785
Lipoic acid metabolism
spiz01100
Metabolic pathways
spiz01110
Biosynthesis of secondary metabolites
spiz01120
Microbial metabolism in diverse environments
spiz01200
Carbon metabolism
spiz01210
2-Oxocarboxylic acid metabolism
Module
spiz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spiz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GJ672_00445 (odhB)
09105 Amino acid metabolism
00310 Lysine degradation
GJ672_00445 (odhB)
00380 Tryptophan metabolism
GJ672_00445 (odhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GJ672_00445 (odhB)
Enzymes [BR:
spiz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
GJ672_00445 (odhB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
DUF4813
DUF1254
HlyD_3
DUF4815
GCV_H
Motif
Other DBs
NCBI-ProteinID:
QGM20895
UniProt:
A0A6B8JP78
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All DBs
Position
94718..96037
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AA seq
439 aa
AA seq
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MSTEVKVPALPESVSEATVVTWHKQAGETVERDENLVDLETDKVVLEVPAPEDGVLGEIL
KAEGETVTAGEVVATLTAGGGADSAAAASPAAAEEAPAKSEAPAEAAAPAPAEAEAPSGE
MPALSPAVRHLVEEHGLDARQIPGTGRNGRILKEDVLKFIESGGGSAAAAPSPAPAPAPS
PAAAPSSEPAPTTSASPAPAASVPTGDREERRVPMTRLRQRIAERLVQAQQNAAMLTTFN
EVNMQPVMDLRGRYKDSFLKTHATKLGFMSFFVKAAVEALKRFPAVNASIDGTDILYHGY
YDIGIAVSTDRGLMVPVLRDADQLSFAEIEAAIADFGQRAQAGKIDLDELTGGTFTITNG
GIFGSLVSTPILNPPQSGILGMHKIQERPMVEGGAVVVRPMMYLAHSYDHRIIDGREAVQ
FLVTIKDMLEDPARLLLEV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaagtcaaggtacccgcgctgccggaatcggtcagcgaggcaacggttgtc
acctggcacaagcaggcgggtgagacggtggagcgcgacgagaacctcgtcgatctcgag
acggacaaggtcgtcctggaggtgccggccccggaggacggtgtgctcggcgagatcctc
aaggccgagggcgagaccgtcaccgccggtgaagtggtggccacgctgacagccggtggc
ggtgcggactccgcggcagcggcctctcccgcggctgccgaagaggcaccggccaaatcg
gaagccccggccgaggcggcggctcctgccccggctgaagccgaagctcccagcggagaa
atgccggcactcagcccggcggtgcgtcatctggtggaggagcacgggctcgacgcgcgg
cagatccccggcaccggtcggaatggccggatcctcaaggaggatgtgctgaagttcatc
gagagcggtggcggcagcgctgcggcggctccgtcccccgcgccggcgccagcgccctca
ccggctgcggcgccctcctccgagccggcaccgacgacctcggcctcgccggcgccggcg
gcatcggtccccaccggggaccgcgaggagcgccgggtgccgatgacccggctgcgccag
cgcatcgccgagcgcctggttcaggcccagcagaacgcggccatgcttaccactttcaac
gaggtgaacatgcagccggtgatggatctgcgcgggcggtacaaggattcgttcctcaag
acccacgccaccaagctcggcttcatgtcgtttttcgtcaaagcggcggtggaggccctg
aagcgcttcccggcggtcaacgcgtccatcgacggcacggatattctttaccacggctac
tacgacatcggtattgcggtgtccacggatcgggggctgatggtgccggtgctgagggat
gcggatcagctgtccttcgccgaaattgaggcggccatcgccgacttcggtcagcgggcg
caggcgggcaagatcgatcttgatgagctcaccggcggcacctttaccatcaccaatggc
ggcattttcggctcactggtctccacgccgatcctgaacccgccgcagagcggcattctg
gggatgcacaaaatacaggagcggcccatggtcgagggcggagccgtggtggtccgcccg
atgatgtatctggcccattcctacgaccaccggatcatcgacggccgtgaggcggtccaa
ttcctggtcaccatcaaggacatgctcgaggacccggcacgcctgctgctggaggtctga
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