Spiribacter sp. 2438: GJ672_02435
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Entry
GJ672_02435 CDS
T06294
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJ672_02435 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_02435 (nth)
Enzymes [BR:
spiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GJ672_02435 (nth)
DNA repair and recombination proteins [BR:
spiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJ672_02435 (nth)
Prokaryotic type
GJ672_02435 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QGM21242
UniProt:
A0A6B8JSK9
LinkDB
All DBs
Position
complement(486480..487127)
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AA seq
215 aa
AA seq
DB search
MNRDKRQAIFECLRAANPHPTTELTFNSPFELLVAVILSAQATDRSVNKATESLFAVANT
PEAILELGEAGLREHIRTIGLFNSKARNVIATCQALVDHHDGQVPRSRKALEALPGVGRK
TANVVLNTAFGEPTMAVDTHIFRVANRTGIARGRNVREVEDRLVRLVPREFLKDAHHWLI
LHGRYVCVARRPRCGACPIYDLCEFKARADYAEAT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgagacaagcggcaggccatcttcgagtgtctgcgggcggccaacccccacccc
accaccgagctgaccttcaactcgccgttcgaactgctggtggcggtgattctgtccgcc
caggccaccgaccgcagcgtcaacaaggccaccgaatcactgtttgccgtggccaatacg
cccgaggccattctcgagcttggcgaggcgggtctgcgggagcacattcgcaccatcggg
ctgttcaacagcaaggctcgcaacgtcatcgccacctgccaggccctggtggaccaccac
gatggccaggtcccgcggagtcgaaaggccctggaagcgctgccgggggtgggtcggaag
accgccaacgtggtgctgaacaccgcctttggcgagccgaccatggcggtggatacccac
atcttccgggttgcgaaccgaaccggcatcgcccgcgggcgcaatgtccgcgaggtggag
gatcggctggtgcggctcgttccccgggaattcctcaaggacgcccaccactggctgatc
ctccacgggcgttatgtctgtgtggcccgccgcccccgctgtggcgcctgtccgatttac
gacctctgcgagttcaaggccagagccgactacgccgaggcgacctga
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