Spiribacter sp. 2438: GJ672_04265
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Entry
GJ672_04265 CDS
T06294
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz01501
beta-Lactam resistance
spiz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GJ672_04265
01503 Cationic antimicrobial peptide (CAMP) resistance
GJ672_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spiz03036
]
GJ672_04265
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spiz02000
]
GJ672_04265
01504 Antimicrobial resistance genes [BR:
spiz01504
]
GJ672_04265
Chromosome and associated proteins [BR:
spiz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GJ672_04265
Transporters [BR:
spiz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GJ672_04265
Antimicrobial resistance genes [BR:
spiz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GJ672_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_CzcB
BSH_RND
Beta-barrel_RND
Biotin_lipoyl
RND-MFP_C
HH_EMRA
BSH_CusB
BSH_Fcp1
HH_MFP_RND
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
QGM21562
LinkDB
All DBs
Position
complement(841215..842336)
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AA seq
373 aa
AA seq
DB search
MSAPPSARGTGERCIIKAMKTRRYSLLLAAVCWLAFSPVNAQMEAPVVVTPVESARHAQT
IQAVGQSRALRSVELQAESSGIVTEVLIEADRRVEAGDVLLRLDDRSEQVAVGLAGTRLA
DARQLLARYRRADGTGAFSEITLDEARREVELAELELRDAEIRLDDRTLRAPFAGFTGLS
DIEPGQRITEDTVVTTLDNREQLRIRFSVAERHYGGLQIGEEITVAAWAQPGSQPSARLT
RIDSRVSASDGTVRAEALLDNAEDRFRPGMRFRVSLDLPGDSHWRIPETALLWGDDGAYA
WRIRDDQAERVRLDLISRNGAHVLVDGPLDEGDDIVSEGVQRMRPGRAVRVIDSATLDNY
PALEAMRDTQADG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccccccatctgctcgcgggacgggtgaacgatgtatcatcaaggcaatgaaa
acccgccgttattccctcctgcttgcagcggtctgctggcttgccttctcaccggtcaac
gcccaaatggaggccccggtggtggtgaccccggtggaatccgcccgtcatgcgcaaacc
attcaggctgtgggccaatcgcgggctctgcgctcggtagaacttcaggccgagagcagc
ggcatcgtcaccgaggtactcatcgaggccgatcggcgggtggaagccggcgatgtcctg
ttgcgcctggatgaccgttccgagcaggtggcggtgggcctggctggcacgcgcctggcg
gatgcccgccaactgctggcccgctaccgccgggcagacggcaccggcgccttctcggaa
atcaccctggacgaagcccggcgtgaagtggagctcgccgagcttgagctccgggacgcg
gaaatccgccttgacgatcgcaccctgcgggcgccctttgctggcttcaccggcctcagt
gacatcgagccgggtcagcgcattaccgaagacacggtggtcaccacactggacaaccgg
gaacagttgcggatccgtttctcggtggccgagcgccattatggcggactgcagatcggc
gaggagatcacggtcgccgcctgggcacagccggggtcacagccctccgcacgcctcacc
cgcatcgacagtcgagtgagcgccagcgacggcacggtgagagccgaggcgctgctggac
aacgccgaagaccggtttcggccgggcatgcgctttcgggtatccctggacctgccgggc
gacagccactggcgaatcccggaaaccgccctcctctggggcgacgatggcgcctatgcc
tggcggatccgcgacgaccaggccgagcgggtccgccttgacctgatcagccgcaacggt
gcccatgtgctggtggacgggccgttagatgagggcgatgacatcgtcagcgaaggggtt
cagcgcatgcgaccgggccgggcggtgcgcgtgattgattccgccaccctggataactac
cccgccctcgaagccatgagggacactcaggccgatggctga
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