Sphingopyxis sp. J-6: V6U71_15215
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Entry
V6U71_15215 CDS
T10764
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj01501
beta-Lactam resistance
spjj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6U71_15215
01503 Cationic antimicrobial peptide (CAMP) resistance
V6U71_15215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_15215
01504 Antimicrobial resistance genes [BR:
spjj01504
]
V6U71_15215
Transporters [BR:
spjj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
V6U71_15215
Antimicrobial resistance genes [BR:
spjj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6U71_15215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF747
Motif
Other DBs
NCBI-ProteinID:
XMG39188
LinkDB
All DBs
Position
complement(3154838..3158254)
Genome browser
AA seq
1138 aa
AA seq
DB search
MSFRNISAWCIRNPVPPIVLFVLLLLAGIVSFNRMDVNDQPDVEFPLVQVMVAQPGAAPT
ELETQVTQRIEAAVRGVSGVDEMSSYVNEGSSSTMIQFAIGTPIDRAYNDVNQAVQQIRS
ELPEGILEPQVVRVDAAGGPITYFAVEATDMTLEQLSWFVDNTVAKELLSIPGMAKVSRS
GGVDREIRVILDPARMQSYGLTASQVNQELRQVNLNAAGGRTEIAGAEQAVRVLGNAASA
FQLGETRISIGNGRTIRLADVAKVTDGYAEQRNLAKIRGKQVLSFAIEKAKGSSDVTIHD
ETMKKLAEITKNNPKVDFKILFTRTDYTKEQYRSSMAAMVEGAVLAVVVVFLFLRDWRAT
LISALAIPLSAIPTFWFMDMMGFSLNALSLLALSLVAGVLVDDAIVEIENIVRHMRMGKT
AYQASIDAADEIGLAVVATTMSIVAVFLPVALMPGISGQFFIQFGMTVVFAVLMSLAVAR
MITPMIAAYFLSAQGEQAHAEGPWIDRYERVLAWTLDNSKHKAVRERFEAVQTRLAFLFV
PLLLAAVTVVFSIVSYFQPVPPGGSRPNTALHFLLQTPAIAIVTFLLTSLLAILLGALAW
KIGVRRFAFTNWAKFMVQRAWARLYDHRVWIVGIGGAAFVTSIILFAVLPQQFQPTINSD
YSQVKYELPPGSTLAQSEHISDQINTILSGDKNVENAFYDVNVGGGGVYITLKKKREVTS
VEWERALQPKMAAIPDARVSFQSQSGGFSGRDITMVIGGDDPVALEKHAMKIVGEMRGLK
EIRSPRIEGDIPRPEIIVTPRTDLAADLGVTTAALSQTIRIATLGDIDQNAAKFSLSDRQ
IPIRVLLSEDSRRSLSTIENLPVPTSRGVTVPLKSVAEIGFGAGPTELRRYNQTRRIVIG
ADLAPGLVTGNAQQKIDALPAVKTMPQGIRKIVQGEAKWQGELIKNFIIAVVAGLMLVFS
TLVLLYRRFVSPLVNMSSLLLAPLGGLLGLVVAGMAISMPVYIGLLMLLGIVAKNSILLV
DFAIEEMDQGVGKMEALLDAGRKRAQPIVMTTVAMVAGMVPTALSLSGDGAWRAPMGVVV
IGGLILSTLLTLLIVPAGFSLADSIEKRLGRFFARNLLTYQPGDDTKPHSAPAPHPAE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcgcaatatttccgcctggtgcatccgcaatccggtgccgccgatcgtcctc
ttcgtgctgttgctgctggcggggatcgtcagcttcaaccggatggacgtaaacgaccag
cccgacgtcgaatttccgctggtgcaggtcatggtggcgcagcccggcgcggcgccgacc
gagctcgaaacgcaggtgacgcagcgtatcgaggcagcggttcgcggcgtcagcggcgtc
gatgaaatgtcgtcctacgtcaacgagggcagcagctcgacaatgatccagtttgcgatc
gggaccccgatcgatcgcgcctataacgacgtcaatcaggccgttcagcaaattcgcagc
gagctgcccgaaggcattctcgagccgcaggtcgtgcgcgtcgacgccgcgggcggaccg
attacctatttcgcggtcgaggcgaccgacatgacgctcgaacagctgtcgtggttcgtc
gacaatacggtggcgaaggaactcctctcgatccccggcatggcgaaggtcagccgttcg
ggcggggtcgatcgcgaaatccgcgtcatcctcgatcccgcaaggatgcagagctatggc
ctgaccgcaagccaggtgaaccaggaattgcgccaggtgaacctcaacgccgccggcgga
cgtaccgagatcgccggcgctgaacaggcggtccgcgtgctcggcaatgcggcgagcgcc
ttccagctcggcgagacgcgcatctcgatcggcaacgggcgcaccattcgtctggccgat
gtggccaaggtgaccgacggctatgccgagcagcgcaatctcgcgaagatccgcggcaaa
caggtgctgagctttgcgatcgaaaaggcaaagggctcgtcggacgtcacgatccacgac
gagacgatgaagaagctcgccgaaatcacgaagaacaacccgaaggtcgatttcaagatc
ctcttcacgcgcaccgactataccaaggaacaatatcgcagctcgatggcggcgatggtc
gagggcgcggtgctggcggtcgttgtcgtcttcctctttctgcgcgactggcgcgcgacg
ttgatcagtgcgctcgcgatcccgctgtccgccattccgaccttctggttcatggacatg
atgggcttctcgctcaacgccctgtcgctgctcgcgctcagcctcgtcgccggggtgctc
gtcgacgacgcgatcgtcgagatcgagaatatcgtcagacatatgcggatgggcaagacc
gcctatcaggcgtcgatcgacgccgccgacgagatcgggctcgcggtcgtcgcgacgacg
atgtcgatcgtcgcggtcttcctcccggtcgcgttgatgccgggcatttcgggccagttc
ttcatccagttcggcatgaccgtcgtcttcgcggtgctgatgagccttgccgtcgcgcgc
atgatcacgccgatgatcgccgcctatttcctgtccgcgcagggcgagcaggcacacgcc
gaagggccatggatcgaccggtacgagcgcgtcctcgcgtggacgctcgacaacagcaag
cacaaggccgtgcgcgagcgtttcgaggccgtgcagacccggcttgccttccttttcgtt
ccgctgctgctcgcggctgtcacggtcgtcttctcgatcgtctcctatttccagccggtc
cccccggggggaagccgcccgaacacggcgctgcacttcctgctgcagacgccggcaata
gcgatcgttactttcctgctgaccagcctgctcgcgatcctgctcggggcgctggcatgg
aagatcggcgtgcgccggttcgccttcaccaattgggcgaagttcatggtccagcgcgcc
tgggcgcgactgtacgaccatcgcgtctggatcgtcggtatcggcggggccgctttcgta
acgagcatcatcctgttcgcggtgctgccgcagcagttccagccgacgatcaacagcgac
tacagccaggtcaaatatgagctgccgccgggttcgacgctggcgcagagcgagcatatc
tccgaccagatcaacacgatcctgtcgggcgacaagaatgtcgaaaatgccttctatgac
gtcaacgtcggcggcggcggtgtctatatcacgctcaagaaaaagcgcgaggtgacgagc
gtcgaatgggaacgtgcgctgcaaccgaagatggcggcgatccccgacgcccgcgtaagc
ttccagagccagtcgggcggcttttccgggcgcgatatcaccatggtgatcggcggcgac
gatccggtcgcgctcgaaaaacatgcgatgaagatcgttggcgaaatgcgcgggctcaag
gaaatccgttcgccgcggatcgagggcgatatcccgcgccccgaaatcatcgtgacgccc
cgcactgaccttgccgctgatctgggcgtgacgacggcggcgctcagccagacgatccgc
atcgcgacgctcggcgatatcgaccagaatgcggccaaattctcgttgtctgatcgccag
attccgatccgcgtcttgctgtccgaagattcgcggcgcagcctgtcgacgatcgagaac
ctgcctgtgccgacgtcgcgcggcgtgacggtgccgctgaaatcggtggcggagatcggc
tttggtgccggccccaccgaactgcgccgctataaccagacgcggcgcatcgtgatcggt
gccgacctggccccggggctggtaacgggcaacgcccagcaaaagatcgacgcgctgcct
gcggtgaagaccatgccgcagggcatccgcaagatcgtgcagggcgaagccaaatggcag
ggcgagctgatcaagaatttcatcatcgcggtggtggcgggcctgatgctcgtcttctcg
acgctggtgctgctctatcgccgcttcgtgtcgccgctcgtcaacatgtcgtcgctgctg
ctcgcgccgctcggcggcctgctggggctcgttgtcgccggcatggcgatttcgatgccg
gtctatatcggcctgctgatgctgctcggcatcgtcgccaaaaactcgatcctgctcgtc
gacttcgcgatcgaggaaatggatcaaggggtcgggaagatggaggcgttgctcgacgcg
ggccgcaagcgcgcgcagccgatcgtcatgacgacggtcgcgatggtcgcgggcatggtg
ccgaccgccttgtcgctgtcgggcgacggggcgtggcgcgcgccgatgggcgtggtcgtg
atcggcggcctgatcctgtcgacgctgctgacgctgttgatcgttcctgccggcttcagc
cttgccgacagcatcgagaagcgtctcggccgcttcttcgcgcgcaacctgctgacgtac
cagcccggcgacgatacgaagccgcactcggcgcccgcgccgcatccggccgaatga
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