Sphingopyxis sp. J-6: V6U71_19305
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Entry
V6U71_19305 CDS
T10764
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj01501
beta-Lactam resistance
spjj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6U71_19305
01503 Cationic antimicrobial peptide (CAMP) resistance
V6U71_19305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spjj03036
]
V6U71_19305
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_19305
01504 Antimicrobial resistance genes [BR:
spjj01504
]
V6U71_19305
Chromosome and associated proteins [BR:
spjj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V6U71_19305
Transporters [BR:
spjj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V6U71_19305
Antimicrobial resistance genes [BR:
spjj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6U71_19305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
XMG42699
LinkDB
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Position
4070818..4071954
Genome browser
AA seq
378 aa
AA seq
DB search
MLSLGACAGKDDEGGRGRGAPEVGYVTAVVQAVPVTTQLGGRTVAFETSEVRPQVNGLIR
RRLFAEGSFVRAGQPLYQIDASLYQAAADQAAANLASARASAQAADEKAKRFEPLAKMQA
VAEQDYTDALAQARVARATVAQNAAALETARINLRYTTLSAPISGRIGRSLATPGALVSA
SQSEPLATIQQTDPIYVDMQQSSAELIRLRQALASGGTQPGSTTVRLKLEDGSDYGFAGT
VQFSEIAVSEATGTVTLRARFPNPKGLLLPGMFVTALFDQSVNPAAMLVPQAAVQRDFDG
SAFVYLVGKDNKAVRRKVTAERTVGANWVVTEGLKPGEKIITQGIGNLKAGAPIKPVPAS
TPQRVGAPAAKGAAAKGN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgctgggcgcttgcgccggcaaggacgacgagggcggacgcgggcgcggcgcc
cccgaggtcggctatgtcacggccgtggtgcaggcggttccggtcaccacccagctcggc
ggccgcaccgtcgcgttcgagaccagcgaggtgcgtccgcaggtgaacggcctgatccgc
cgccgcctgttcgccgaaggcagcttcgtgcgcgccgggcagccgctctaccagatagac
gccagcctgtatcaggcggcggcggatcaggccgcggcgaatctggcgagcgcgcgggca
agcgcgcaggccgccgacgaaaaggcaaagcgcttcgagccgctcgccaagatgcaggcg
gtcgccgagcaggattataccgacgcgctggcgcaggcgcgcgtcgcgcgcgcgacggtg
gcgcaaaatgccgcggcgctcgaaaccgcgcggatcaacctgcgctacacgacgctttcc
gcaccgatcagcgggcggatcgggcgcagcctcgccacccccggcgcgctggtcagcgcg
agccagtcggagccgctggcgacgatccagcagaccgatcccatctatgtcgacatgcag
cagtcgagcgccgaactcatccggctgcgccaggcgctggcgagcggcggcacccagccc
ggcagcacgacggtgcggctgaagctcgaggacggcagcgattacgggttcgccggcacc
gtccagttttcggagatcgcggtcagcgaagcgacgggcacggtgacgctgcgcgcgcgc
ttccccaatcccaaggggctgttgctgcccggcatgttcgtcaccgcgctgttcgaccag
tcggtcaacccggccgcgatgctggtgccgcaggctgccgttcaacgcgacttcgacgga
tcggcgttcgtctaccttgttggcaaggacaacaaggcggtgcggcgcaaggtcaccgcc
gagcggacggtcggcgccaactgggtcgtcaccgaagggctgaagcccggcgaaaagatc
atcacgcaggggatcggcaacctcaaggccggagcgccgatcaagccggttccggcgagc
acgccgcagcgggtcggggcgcccgcggccaagggcgcggcagcgaaaggaaattaa
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