Sphingopyxis sp. J-6: V6U71_19310
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Entry
V6U71_19310 CDS
T10764
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj01501
beta-Lactam resistance
spjj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6U71_19310
01503 Cationic antimicrobial peptide (CAMP) resistance
V6U71_19310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_19310
01504 Antimicrobial resistance genes [BR:
spjj01504
]
V6U71_19310
Transporters [BR:
spjj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
V6U71_19310
Antimicrobial resistance genes [BR:
spjj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6U71_19310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XMG39971
LinkDB
All DBs
Position
4071961..4075188
Genome browser
AA seq
1075 aa
AA seq
DB search
MSRLFIDRPIFAWVLAIIVMLGGLGALFSLPIEQYPDIAPAQVNIRANYPGASAETIENS
VTQVLEQQLTGIDGLLYFSSQSSSRGQASITAIFEKGTDPDIAQVQVQNKIQTAISRLPQ
QVQQQGIRVTKSNADTLLLVAVYDSTNTRSNQDVSDYMASNIQDPLSRVEGVGDVNIFGA
PHAMRIWLNPQRLAAMSLMPSDVISAITAQNSEVAAGDVGGLPAPQGQMLNATVTAQSRM
QTVEEFENIVLKTLPDGSSVRIKDIARVEVGAESYAVISRINGHPGAGMSISLSPGSDAL
ETADRVKARMAELAADFPDGVTYSYANDATAFIKLSVSEVQKSLFEAILLVILVMFVFLQ
SWRAVLIPAIAVPVVLLGTFGIFYMAGFSINTMTLFGLTLAIGLLVDDAIVVVENVERLM
EENPGMSAREATIQSMQELQVALIAIALVLSAVFMPMAFFGGSTGVIYRQFSITIVSAMA
LSVLVALILSPALTSSLLKPKTHGETAETHRFPRLHALGERLKNGFNTRFDRTVNRYVGS
VGAVVDRKWLFLGIYAVILVLLAVLFLRLPSGFLPNEDQGRVQVQFRLPAGATQERTLEV
RNAVEDYFLTHEKANTGALFLIAGGGGGAAAGQNTGQGYVNLVDWDDRPGDENTADAITE
RARKALSGLRDAQVFALVPGAVRGLGDTSGFTMQFQNRGGLSREQFSAARDRLLAMANAN
PKLTSVRLSDLPDVATLKVDIDTQRLTAYGLTNSDVNNTLATAWGGRYVNDFIDKGRVKR
VYVQGDAPYRAKPEDLGQWYVRSADGEMSPFSAFSRIGWATTPATTSRFQGVSAFEISGQ
PSAGVSSGEAMDEMEAMAAQIPGTSVAWSGSSYQERLSSGQAPFLYAISLLVVFLCLAAL
YESWSIPLAVILIVPLGLIGAVFAVTLRGLENDVYLQIGLLTTMGLAAKNAILMIEFAEQ
EERKGKRVIEAAIEAARIRLRPILMTSFAFIFGVLPLAIATGAGANSRVAIGTAVIGGML
TAAFLAIFFIPLFFVLVRRGVRDGLAALRRRFGKDKDGDKDGDKDTGAGGTEVPA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccttttcatcgaccggccgatctttgcctgggtgctggcgatcatcgtcatg
ctcggcgggctgggcgcgctcttttcgctgccgatcgaacaatatcccgatatcgccccg
gcgcaggtcaatatccgcgccaactatccgggcgcgtcggccgagacgatcgagaacagc
gtcacgcaggtgctcgaacagcaactgaccgggatcgacggcctgctctatttcagctcg
caatcgagttcgcgcgggcaggcgagcatcaccgcgatcttcgagaagggcaccgatccc
gacatcgcgcaggtgcaggtccagaacaagatccagaccgcgatttcgcgcctgccgcag
caggtgcagcaacagggcatccgcgtcaccaagtcgaacgccgacacgctgctcctcgtc
gcggtctatgattcgacgaacacccggtcaaaccaggacgtgtccgactatatggcgtcg
aacatccaggacccgctgtcgcgcgtcgagggggtcggcgacgtcaacatcttcggcgcg
ccgcacgcgatgcgcatctggctgaacccgcagcggctggcggcgatgtcgctgatgccg
agcgacgtcatttcggcgatcaccgcgcagaacagcgaggtcgccgccggcgacgtcggc
ggcctccccgcgccgcagggccagatgctcaacgcgaccgtcaccgcgcaatcgcggatg
cagaccgtcgaggagttcgagaatatcgtcctcaagacgctccccgacgggtcgagcgtg
cgcatcaaggatatcgcgcgggtcgaggtcggcgccgaaagctatgccgtcatcagccgc
atcaacggccatcccggtgccggcatgtcgatctcgctgtcgccggggtccgacgcgctc
gaaaccgccgaccgggtcaaggcgcggatggcggaactcgccgccgatttccccgacggc
gtgacctacagctacgccaacgatgcgaccgccttcatcaagctgtcggtcagcgaggtg
cagaaatcgctgttcgaagcgatcctgctcgtcatccttgtcatgttcgtcttcctgcag
agctggcgcgcggtgctgatcccggcgatcgcggtgccggtggtgctgctcggcaccttc
ggcattttctatatggccgggttcagcatcaatacgatgaccctgttcgggctgacgctt
gccatcggcctgctcgtcgacgacgcgatcgtcgtcgtcgagaatgtcgagcgattgatg
gaagaaaatcccggcatgtcggcgcgcgaggcgacgatccagtcgatgcaggaattgcag
gtcgcgctgatcgcgatcgcgctcgtgctgtcggcggtgttcatgccgatggcctttttc
ggcggctcgaccggcgtcatctaccggcaattctcgatcaccatcgtctcggcgatggcg
ctgtcggtgctcgtcgcgctgatcctcagccccgcgctgacgtcgagcctgctcaagccc
aagacgcatggcgagacggcggagacacaccgctttccgcgcctgcacgcgcttggcgaa
cggctgaagaacggcttcaacacccgtttcgaccgcaccgtgaaccgctatgtcggcagc
gtcggcgcggtggtcgaccgcaaatggctcttcctcggcatctatgccgtcatcctcgtc
ctgctcgcggtgctgttcctgcgcctgccgagcggcttcctgccaaacgaggatcagggc
cgcgtccaggttcagttccgcctgcccgccggcgccacccaggagcgcacgctcgaggtg
cgtaacgcggtcgaagattatttcctgacccacgaaaaggcgaacaccggcgcgctgttt
ctgatcgccggcggcggcggcggggccgcggcaggccagaacaccggccaaggatatgtc
aatcttgtcgactgggacgaccggccgggcgacgagaacaccgccgatgcgatcaccgag
cgagcgcgcaaggccttgagcgggctgcgcgacgcacaggtcttcgcgctcgtccctggc
gcggtccgcggactcggcgacacgtcgggtttcacgatgcagttccagaatcgcggcggg
ctcagccgcgaacaattctctgccgcgcgcgaccggctgcttgcgatggcgaacgccaat
cccaagctgacctcggtgcgcctcagcgaccttcccgacgtcgcgacgctcaaggtcgat
atcgatacccagcggctgaccgcctatgggctgaccaacagcgacgtgaacaacaccctc
gcgaccgcctggggtggccgctacgtcaatgatttcatcgacaagggccgcgtcaagcgc
gtctatgtccagggcgacgccccctatcgcgccaagcccgaagacctcggccaatggtac
gtccgctcggcggacggcgagatgtcgcccttctcggccttttcgcgcatcggctgggcg
accacccccgcgaccacgtcgcgcttccagggtgtttcggcattcgagatttcgggccag
ccgtccgccggggtcagctcgggcgaggcgatggacgaaatggaggcgatggcggcgcag
attcccgggaccagcgtcgcctggtcgggctcctcctatcaggagcggctgtcgtcggga
caggcgcccttcctttatgcgatttcgctgctcgtcgtcttcctctgcctcgcggcgctc
tacgaaagctggtcgatcccgctcgcggtgatcctgatcgtcccgctcgggctgatcggc
gcggtgttcgcggtgacgctgcgcgggctcgagaacgacgtctatctccagatcgggctg
ctcaccacgatggggctcgcggcgaaaaatgcgatcctgatgatcgaattcgccgaacag
gaggaacgcaagggcaagcgcgtgatcgaggccgcgatcgaggcggcgcgcatccgcctg
cggccgatcctgatgaccagcttcgccttcatcttcggcgtgctgccgctggcgatcgcg
accggcgccggcgcgaacagccgcgtcgcgatcggcaccgcggtgatcggcggcatgctg
accgccgccttcctcgccatcttcttcatcccgctcttcttcgtcctcgtcagaaggggc
gtccgcgacggcctcgccgcgctgcgccgccgcttcggcaaggacaaggatggggacaag
gacggcgacaaggacacgggcgccggcgggacggaggttccggcatga
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