Sphingobium sp. JS3065: NUH86_03945
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Entry
NUH86_03945 CDS
T10812
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NUH86_03945 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_03945 (nth)
Enzymes [BR:
spjs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NUH86_03945 (nth)
DNA repair and recombination proteins [BR:
spjs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NUH86_03945 (nth)
Prokaryotic type
NUH86_03945 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UZW55954
LinkDB
All DBs
Position
1:complement(803035..803685)
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AA seq
216 aa
AA seq
DB search
MNKAQIFDFFSRLAEANPAPRTELEYGNDYQLLVAVVLSAQATDVGVNKATRALFREVHT
PQQMVDLGEEGLKTHIKTIGLFNAKAKNVIALSEILVRDFGGEVPQDRDILTTLPGVGRK
TANVVMNTAFGQETFAVDTHIFRVGNRTGLATGKTPLAVELKLEKGVPGPFRRDAHHWLI
LHGRYVCKARKPECWRCIVADLCRFKPKTPAPGSPN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcccagatattcgactttttcagccgcctcgcggaggccaatccggccccc
cgcacggaactggaatatggcaatgactatcagcttctggtggcggtggtcctgtcagcc
caggccacggacgtcggcgtcaacaaggcgacccgcgccctcttccgcgaagtccacacg
ccgcaacaaatggtcgatctgggcgaagaggggctgaagacccacatcaagaccatcggc
ctgttcaatgcgaaggcgaagaatgtcatcgccctgtcggaaatactggtccgcgatttt
ggcggagaagtgccgcaggaccgcgacatcctgaccaccctgcccggcgtcgggcgcaag
acggccaatgtcgtcatgaacaccgccttcgggcaggagacgttcgcggtcgacacccat
atcttccgcgtcggcaaccgcaccggactggcgactggcaaaacgccgctggccgtcgaa
ctgaagctggaaaagggcgtccccggccccttccgccgcgacgcgcatcactggctgatc
ctgcacggccgctatgtctgcaaggcgcgaaagcccgaatgctggcgctgcatcgtcgcc
gacctctgccgcttcaagcccaagacgcctgcgcccggaagcccgaactga
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