Sphingobium sp. JS3065: NUH86_04725
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Entry
NUH86_04725 CDS
T10812
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs01501
beta-Lactam resistance
spjs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NUH86_04725
01503 Cationic antimicrobial peptide (CAMP) resistance
NUH86_04725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjs02000
]
NUH86_04725
01504 Antimicrobial resistance genes [BR:
spjs01504
]
NUH86_04725
Transporters [BR:
spjs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NUH86_04725
Antimicrobial resistance genes [BR:
spjs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NUH86_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF6232
Motif
Other DBs
NCBI-ProteinID:
UZW56096
LinkDB
All DBs
Position
1:964467..967673
Genome browser
AA seq
1068 aa
AA seq
DB search
MNLGVSGRLTRATIASPLTPLFLLAAIAVGLLALLSIPREEEPQISVPMVDIQVMAPGLS
AADATELVGIPLETIVKSVDGVEHVYTQAQDDGVMVTARFLVGSNPEDAAIRIEEKLRAN
WDRKPVGIPDPKVTVRGINDVPAVVLTLAPKPGAAGQWNDASLYELAAKLRTEIAKVDNV
GISFLVGGRPEEIRIAPDPARLRQYGVPLGSVIEAASQANRSFPLGNIREDGKAVGVTAG
RTLSSAQEVGLLTVRSASGSPVYLRDVASVTQGPREDQARAWRWAKEENGKWHSAPAVSI
AFAKRAGANAVVVSDAILERVESLKGKLIPDDVTVAVTRNYGETANEKANELLFHLALAT
VSIVVLIGFAIGWREAGVTAVVIPTTILLTMFASNLMGYTINRVSLFALIFSIGILVDDA
IVMIENIARHWAMDDDRNRTQAAIEAVAEVGNPTVVATLTVVAALLPMLFVSGLMGPYMA
PIPVNASAAMIFSFFVAVVIAPWLMIRFARKTLGSGHGHDESGGKLGQLYARVAHRVIDT
KKSARNFLIAVGVATLVACSMFYFKAVTVKLLPFDNKSEVQVVVDMPEGTALENTGRVLE
DVAGVVRGLPEATAMEAYVGTSAPFNFNGLVRHYFLRSQPEQGDVMVTLLPKGDRSRSSH
QIALDLRQRLKALRLPNGASIKVVETPPGPPVLATLLAEVYGPDEVTRQKTASELEKIFK
SVPFIVDVDNSFGEARPKLRLDVQRDRLDYYGLSQRQVADSIGMLMGSQTVGYAPRGDGR
SPLPITIALEQKDRSWTQALSSMPVAQTPGGQLIDLGAVVEARTETGSPAIFRRDGRYAD
MVTAELAGAYEAPIYGMIEVNRAVDAYDWAAKGLQKPEIRLNGQPEDESVPSLLWDGEWE
ITWVTFRDMGGAFMVALLAIYIIVVAQFKSFRLPLVILTPVPLTLVGIVIGHMLFRAPFT
ATSMIGFIALAGIIVRNSILLVDFIRHSATPDKSLRDVLLEAGTIRFKPIVLTAAAAMIG
AAVILTDPIFQGLAISLLFGLASSTLLTVLVIPAIYIVLRDDGKPATR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcggtgtttccggtcgcctcaccagggccactatcgcttcccccctgacgccg
ctgtttctgctggcggcgatcgctgtcggtctgctggctcttctttccatcccaagggag
gaggaaccgcagatcagcgtgccgatggtggacattcaggtgatggcgcccggcctgtcc
gccgccgatgcgaccgagctggtgggcattccgctcgaaaccatcgtcaagagcgtcgac
ggggtggagcatgtctatacccaggcgcaggacgatggcgtaatggtgacggcgcgcttc
ctcgtcgggtcgaacccggaggatgcagcgatccgcatcgaggagaagctgcgcgccaat
tgggatcgtaagccggtcggcatccccgatcccaaggtgacggtgcgcggcattaacgac
gttcccgctgtcgtcctgacccttgcccccaagcccggcgcggcagggcagtggaacgat
gccagcctctacgaactcgccgcgaagctgcgcaccgagatcgccaaggtcgacaatgtc
gggatcagcttcctcgtcggtggccgccccgaggaaatccgcattgcgcccgatccggcc
aggctccgccagtatggcgtgccgctggggagcgtgatcgaggccgcgagccaggccaat
cggtcctttccgctgggtaatatccgcgaggacggcaaggcggtcggcgtcacggcgggc
cgcaccctgtcatcggcgcaggaggtcggacttctgaccgtgcgctctgcctccggctcg
cccgtctatctgcgcgacgttgccagcgtaacgcaggggccgcgcgaggatcaggcgcgg
gcgtggcgctgggcgaaggaggaaaacggcaagtggcatagcgcccccgccgtcagcatc
gccttcgccaagcgcgccggcgccaatgccgtggtggtgtccgatgcgatcctcgagcgc
gtcgagagcctgaaaggcaagctcatccccgatgacgtcacggtcgccgtcacccgcaac
tatggcgagacggcgaacgagaaggccaacgagctgctgttccatctggcgctggcgacc
gtctccatcgtcgtgctgatcggcttcgcgatcgggtggcgcgaggcgggcgtgaccgcc
gtggtcattccgacgacgatcctgctgaccatgttcgcctcgaacctcatgggctacacc
atcaaccgcgtcagcctgttcgcgctgatcttctcgatcggcatcctcgtcgacgacgcg
atcgtcatgatcgagaatatcgcgcgccattgggcgatggacgatgaccgcaaccgtacc
caggccgcgatcgaggcggtggcggaggtcggcaatcccacggtggtcgcgacattgacc
gtggttgcggcgctgctgccgatgctgttcgtttccggcctgatgggcccctacatggct
cccatcccggtcaatgcgtcggcggcgatgatcttttccttcttcgtcgccgtggtcatt
gcgccgtggctgatgatccgttttgcccgcaagacgctcggctctggccacggccatgac
gagagcggcggcaagctggggcagctctatgcccgtgtcgcgcatcgcgtcatcgatacg
aagaagtccgcccgcaatttcctgatcgcggtgggcgtggcgacactggtcgcctgctcg
atgttctatttcaaggccgttaccgtgaagctgctgcccttcgacaacaagtcggaggtt
caggtcgtggtcgatatgcccgaaggcaccgcgctcgaaaacacgggccgcgtgctggaa
gatgttgccggcgtggtgcgaggcttgcccgaagcgacggcgatggaggcctatgtcggc
acatcggcgccgttcaacttcaacggccttgtccgccattatttcctgcgctcgcagccc
gagcagggcgatgtgatggtgacgctgctgcccaagggggatcgcagccggtccagccat
cagattgcgctcgacctgcgccagcggctgaaggcgctgcgcttgcccaatggcgcatct
atcaaggtggtcgagacgcctccaggaccgcccgtcctcgcgaccctgctggccgaggtc
tatggccccgacgaagtcacgcgccagaagacagcgtccgagctggaaaagatcttcaag
tccgtccccttcatcgtcgacgtggacaacagcttcggcgaggcgcgcccgaagctccgc
ctcgacgtgcagcgcgaccggctcgattattacggcctttcccagcggcaggtcgccgac
agcatcggtatgctcatggggagccagactgtcggctacgcgccgcgcggcgatggccgc
agcccactaccgattacaatcgcgctggaacagaaggaccgcagctggacgcaagccttg
tcgagtatgcctgtcgcacagacgccgggcggccagctcatcgaccttggcgcggtggtc
gaagcgcgcaccgagacggggagtcctgcgatcttccgccgtgacggtcgatatgccgac
atggtcacggccgagctggccggagcctatgaagcgccgatctacggcatgatcgaagtg
aaccgcgcggtcgatgcctatgactgggcggccaagggcctccagaagccggaaatccgt
ctcaacggtcagcccgaggatgagagcgtgccgtccctgctctgggatggcgaatgggag
atcacctgggtcacgttccgcgacatgggcggcgccttcatggtcgcgctgctggcgatc
tacatcatcgtcgtcgcgcagttcaaaagcttccgcctgccgctcgtgatcctgacgccg
gtgccgctcacgctggtcgggatcgtcattggccacatgctgttccgtgcaccgtttacg
gcaacctcgatgatagggttcatcgcgctcgccggtatcatcgtgcgcaactcgatcctg
ctggtcgacttcatccgccattcggccacgccggacaaatcgctgcgcgacgtgctgctg
gaagccggcacgatccggttcaagccgatcgttctcacggccgccgcggcgatgattggc
gcggccgtgatcctgaccgatccgatctttcagggtttggcgatctcgctgctgttcggc
cttgcgtcctcgacgctgctgaccgtgctggttattccggccatttacatcgtgcttcga
gatgatgggaaacccgcgaccagatga
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