Sphingobium sp. JS3065: NUH86_09525
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Entry
NUH86_09525 CDS
T10812
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs01501
beta-Lactam resistance
spjs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NUH86_09525
01503 Cationic antimicrobial peptide (CAMP) resistance
NUH86_09525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spjs03036
]
NUH86_09525
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjs02000
]
NUH86_09525
01504 Antimicrobial resistance genes [BR:
spjs01504
]
NUH86_09525
Chromosome and associated proteins [BR:
spjs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NUH86_09525
Transporters [BR:
spjs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NUH86_09525
Antimicrobial resistance genes [BR:
spjs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NUH86_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_RND
CzcB_C
BSH_CusB
BSH_CzcB
RND-MFP_C
HH_MFP_RND
BSH_RND
Beta-barrel_YknX
CSD2
Motif
Other DBs
NCBI-ProteinID:
UZW53794
LinkDB
All DBs
Position
1:complement(1991763..1992821)
Genome browser
AA seq
352 aa
AA seq
DB search
MRTILPILLIALTLSACGGQKEKKARPPALVEAAPIASESFTDNLDAVGTAFANEQVVLS
APVTERITSINFSDGGFVGKGQVIATLAVGQEQAELAAAQAQALQAQQQLNRIQALKARG
FATAASLDSQIALANAARASAQQARASIGDRVIRAPFPGWVSLRTVSPGAIVTAGTPIAT
VSDISRIKLDFTIPETRLSMIREGQAIKAISAAWPDRPFTGTVATIDPVIDPATRAVRIR
AILPNPDRALKPGMLLTVNVIAKQRQSLAVPELAVVGDGEERFVFLVEGGKAKRTKVDTG
IRQNGLVEILGGVKPGQTVVTDGVVKLTDGVPVRLPGDKPEAKSASAGRAAG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccatcctgcctatcctcctgatcgcgctgaccctttccgcctgtggcggtcaa
aaggaaaagaaagcgcgtccgccagcactggtcgaagctgcgccgatcgcgtccgaaagc
ttcaccgacaatctggacgccgtcggcaccgccttcgccaatgaacaggtggtgctgtcc
gccccggtgacggagcgcatcacctccatcaatttcagcgacgggggctttgtcggcaag
gggcaggtgatcgcgaccctggccgtggggcaggaacaggcggaactcgccgccgcccaa
gcccaggcgttgcaggcacaacagcaattgaaccgcattcaggcgttgaaagcgcgcggc
ttcgcgaccgccgccagcctcgacagccagatcgcgctggccaatgccgcccgcgccagc
gcgcaacaggcccgcgcctccatcggtgaccgggtgatccgcgcgcccttccccggctgg
gtcagcctgcgcaccgtatcgcccggcgccatcgtcaccgccggcacgccgatcgcgacg
gtcagcgatatttcgcggatcaagctggatttcaccattcccgaaacccgcctatcgatg
atccgggaagggcaggcgatcaaggcgatctccgccgcctggcccgaccggcccttcacc
ggcacggtcgccactatcgatccggtgatcgatcccgccacccgcgccgtcaggatacgc
gccatcctgcccaatcccgaccgcgcgctgaagccgggcatgctgctgaccgtcaatgtg
atcgccaagcagcgccagtcgctggccgtgccggaactggcggtggtgggcgatggcgag
gagcggttcgtcttcctggtggagggtggcaaggccaagcggaccaaggtcgacaccggc
attcgccagaacggcctggtcgagatattgggcggggtgaagccgggccagaccgtcgtc
accgacggcgtcgtcaagctgaccgacggcgtacccgtgcgcctgccgggcgacaagccg
gaggcgaagagtgcgagcgccggtcgggcggccggttaa
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